CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG24799

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38480.1	KXG24799	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053090_P001	Maize	plastid	98.12	97.39
Zm00001d007446_P003	Maize	cytosol	98.5	94.93
Os11t0546900-01	Rice	plasma membrane	92.86	93.21
TraesCS4D01G155900.1	Wheat	plastid	92.86	92.86
TraesCS4A01G151000.2	Wheat	cytosol	92.86	91.48
TraesCS4B01G159900.1	Wheat	cytosol	93.61	91.21
GSMUA_Achr9P28460_001	Banana	cytosol	44.74	90.15
HORVU4Hr1G043300.1	Barley	cytosol	93.98	83.33
OQU80487	Sorghum	cytosol	80.08	83.2
Bra001049.1-P	Field mustard	cytosol	81.58	83.14
Solyc03g034180.2.1	Tomato	cytosol	80.45	82.95
CDX74252	Canola	cytosol	81.2	82.76
Bra040592.1-P	Field mustard	cytosol	81.2	82.76
CDY51543	Canola	cytosol	81.2	82.76
EES15274	Sorghum	cytosol	78.57	82.61
KRH01783	Soybean	nucleus	79.7	82.49
CDY28698	Canola	cytosol	80.83	82.38
Zm00001d048554_P001	Maize	cytosol	60.9	82.23
VIT_14s0006g03230.t01	Wine grape	cytosol	80.83	82.06
CDX91996	Canola	cytosol	80.45	81.99
EES10954	Sorghum	cytosol	80.08	81.61
Solyc02g063070.2.1	Tomato	plastid	79.7	81.54
PGSC0003DMT400062153	Potato	cytosol	79.7	81.54
Bra028409.1-P	Field mustard	cytosol	78.95	81.4
CDX67405	Canola	cytosol	78.57	81.01
Zm00001d021885_P001	Maize	mitochondrion	50.0	80.61
CDY71290	Canola	cytosol	77.82	80.54
CDX74521	Canola	cytosol	77.44	80.16
AT3G02520.2	Thale cress	cytosol	79.7	80.0
AT5G38480.1	Thale cress	cytosol	76.69	80.0
CDY01659	Canola	cytosol	77.07	79.77
Bra028187.1-P	Field mustard	cytosol	76.69	79.38
KRH46909	Soybean	cytosol	77.07	78.85
PGSC0003DMT400050389	Potato	cytosol	76.69	78.46
Zm00001d033357_P001	Maize	cytosol	60.9	77.51
Zm00001d007968_P001	Maize	cytosol	60.15	76.56
Zm00001d017434_P001	Maize	cytosol	60.15	76.56
AT5G16050.2	Thale cress	cytosol	76.69	76.12
EES14338	Sorghum	cytosol	73.31	75.29
HORVU4Hr1G031770.1	Barley	cytosol, plastid	39.85	61.99
Zm00001d018856_P001	Maize	cytosol, plastid	64.66	56.95
EES10091	Sorghum	cytosol	49.25	53.04
Zm00001d039042_P001	Maize	cytosol, nucleus, plasma membrane, plastid	65.41	42.75

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
EntrezGene:8057015	UniProt:A0A1Z5RIM0	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0019904	InterPro:IPR036815	EnsemblPlants:OQU83613	ProteinID:OQU83613	ProteinID:OQU83613.1	PFAM:PF00244
PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF34
SMART:SM00101	EnsemblPlantsGene:SORBI_3005G145201	SUPFAM:SSF48445	UniParc:UPI0001A864FD	RefSeq:XP_002449656.1	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:61041785..61045001

Molecular Weight (calculated)

29344.3 Da

IEP (calculated)

4.513

GRAVY (calculated)

-0.460

Length

266 amino acids

Sequence
(BLAST)

001: MSPSEPTREE SVYMAKLAEQ AERYEEMVEF MERVARSAGG AGGGEELSVE ERNLLSVAYK NVIGARRASW RIISSIEQKE EGRGNEAHAA SIRAYRSKIE
101: AELARICDGI LALLDSHLVP SAGAAESKVF YLKMKGDYHR YLAEFKSGAE RKDAAESTMN AYKAAQDIAL ADLAPTHPIR LGLALNFSVF YYEILNSPDR
201: ACNLAKQAFD EAISELDSLG EESYKDSTLI MQLLRDNLTL WTSDTNEDGG DEIKEAAAPK ESTEGQ

Best Arabidopsis Sequence Match ( AT1G78300.1 )
(BLAST)

001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ

Arabidopsis Description

GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.