Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU7Hr1G060360.1 | |
| HORVU7Hr1G060410.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G38480.1 | HORVU7Hr1G060360.1 | AT2G18876.1 | 21798944 |
| AT5G38480.1 | HORVU7Hr1G060410.1 | AT2G18876.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G155900.1 | Wheat | plastid | 87.0 | 98.12 |
| TraesCS4A01G151000.2 | Wheat | cytosol | 87.0 | 96.67 |
| TraesCS4B01G159900.1 | Wheat | cytosol | 87.67 | 96.34 |
| OQU83613 | Sorghum | cytosol | 83.33 | 93.98 |
| Zm00001d053090_P001 | Maize | plastid | 82.67 | 92.54 |
| Os11t0546900-01 | Rice | plasma membrane | 81.67 | 92.45 |
| GSMUA_Achr9P28460_001 | Banana | cytosol | 40.0 | 90.91 |
| Zm00001d007446_P003 | Maize | cytosol | 82.33 | 89.49 |
| HORVU4Hr1G007370.1 | Barley | plasma membrane | 73.33 | 84.29 |
| Solyc03g034180.2.1 | Tomato | cytosol | 72.33 | 84.11 |
| KRH01783 | Soybean | nucleus | 70.67 | 82.49 |
| VIT_14s0006g03230.t01 | Wine grape | cytosol | 72.0 | 82.44 |
| Bra001049.1-P | Field mustard | cytosol | 71.67 | 82.38 |
| CDY51543 | Canola | cytosol | 71.33 | 81.99 |
| Bra040592.1-P | Field mustard | cytosol | 71.33 | 81.99 |
| CDX74252 | Canola | cytosol | 71.33 | 81.99 |
| Solyc02g063070.2.1 | Tomato | plastid | 71.0 | 81.92 |
| PGSC0003DMT400062153 | Potato | cytosol | 71.0 | 81.92 |
| CDY28698 | Canola | cytosol | 71.0 | 81.61 |
| CDX91996 | Canola | cytosol | 70.67 | 81.23 |
| HORVU2Hr1G080630.1 | Barley | cytosol | 70.67 | 80.61 |
| Bra028409.1-P | Field mustard | cytosol | 69.0 | 80.23 |
| Zm00001d048554_P001 | Maize | cytosol | 52.67 | 80.2 |
| AT3G02520.2 | Thale cress | cytosol | 70.67 | 80.0 |
| AT5G38480.1 | Thale cress | cytosol | 68.0 | 80.0 |
| CDX67405 | Canola | cytosol | 68.67 | 79.84 |
| CDX74521 | Canola | cytosol | 68.33 | 79.77 |
| Bra028187.1-P | Field mustard | cytosol | 68.33 | 79.77 |
| CDY71290 | Canola | cytosol | 68.0 | 79.38 |
| CDY01659 | Canola | cytosol | 68.0 | 79.38 |
| KRH46909 | Soybean | cytosol | 68.67 | 79.23 |
| PGSC0003DMT400050389 | Potato | cytosol | 68.33 | 78.85 |
| Zm00001d021885_P001 | Maize | mitochondrion | 42.67 | 77.58 |
| AT5G16050.2 | Thale cress | cytosol | 69.0 | 77.24 |
| Zm00001d033357_P001 | Maize | cytosol | 52.33 | 75.12 |
| Zm00001d007968_P001 | Maize | cytosol | 51.67 | 74.16 |
| Zm00001d017434_P001 | Maize | cytosol | 51.67 | 74.16 |
| HORVU0Hr1G004990.4 | Barley | cytosol | 56.67 | 71.13 |
| HORVU4Hr1G031770.1 | Barley | cytosol, plastid | 39.67 | 69.59 |
| Zm00001d018856_P001 | Maize | cytosol, plastid | 55.67 | 55.3 |
| HORVU4Hr1G031620.11 | Barley | cytosol | 41.67 | 46.3 |
| Zm00001d039042_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 55.67 | 41.03 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| UniProt:A0A287NVR9 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 |
| EnsemblPlantsGene:HORVU4Hr1G043300 | EnsemblPlants:HORVU4Hr1G043300.1 | InterPro:IPR036815 | PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 |
| ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF34 | SMART:SM00101 | SUPFAM:SSF48445 |
| UniParc:UPI000B475DDF | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:344119395..344123155
Molecular Weight (calculated)
32975.7 Da
IEP (calculated)
4.805
GRAVY (calculated)
-0.504
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: PRTSPQTRIA SYAPGSAAPP PNSVATRPLH KRATMSPAEP TRDESVYMAK LAEQAERYEE MVEFMERVAK ATGGAGPGEE LSVEERNLLS VAYKNVIGAR
101: RASWRIISSI EQKEEGRGNE AHAATIRSYR TKIEAELAKI CDGILALLDS HLVPSAGAAE SKVFYLKMKG DYHRYLAEFK SGAERKEAAE STMNAYKAAQ
201: DIALADLAPT HPIRLGLALN FSVFYYEILN SPDRACNLAK QAFDEAISEL DSLGEESYKD STLIMQLLRD NLTLWTSDTN EDDVDEIKEA PAPKESGDGQ
101: RASWRIISSI EQKEEGRGNE AHAATIRSYR TKIEAELAKI CDGILALLDS HLVPSAGAAE SKVFYLKMKG DYHRYLAEFK SGAERKEAAE STMNAYKAAQ
201: DIALADLAPT HPIRLGLALN FSVFYYEILN SPDRACNLAK QAFDEAISEL DSLGEESYKD STLIMQLLRD NLTLWTSDTN EDDVDEIKEA PAPKESGDGQ
001: MAAPPASSSA REEFVYLAKL AEQAERYEEM VEFMEKVAEA VDKDELTVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE SRGNDDHVTT IRDYRSKIES
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
Arabidopsis Description
GF14 PHIGF14 protein phi chain [Source:UniProtKB/TrEMBL;Acc:F4HWQ5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.