Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G292000.1 | |
| TraesCS7B01G183000.7 | |
| TraesCS7D01G288000.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G38480.1 | TraesCS7A01G292000.1 | AT2G18876.1 | 21798944 |
| AT5G38480.1 | TraesCS7B01G183000.7 | AT2G18876.1 | 21798944 |
| AT5G38480.1 | TraesCS7D01G288000.2 | AT2G18876.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G155900.1 | Wheat | plastid | 96.34 | 98.87 |
| TraesCS4A01G151000.2 | Wheat | cytosol | 96.7 | 97.78 |
| OQU83613 | Sorghum | cytosol | 91.21 | 93.61 |
| Os11t0546900-01 | Rice | plasma membrane | 90.11 | 92.83 |
| Zm00001d053090_P001 | Maize | plastid | 90.48 | 92.16 |
| GSMUA_Achr9P28460_001 | Banana | cytosol | 43.59 | 90.15 |
| Zm00001d007446_P003 | Maize | cytosol | 90.11 | 89.13 |
| HORVU4Hr1G043300.1 | Barley | cytosol | 96.34 | 87.67 |
| Solyc03g034180.2.1 | Tomato | cytosol | 78.75 | 83.33 |
| TraesCS4B01G045500.2 | Wheat | cytosol | 79.49 | 83.14 |
| VIT_14s0006g03230.t01 | Wine grape | cytosol | 78.75 | 82.06 |
| CDX74252 | Canola | cytosol | 78.39 | 81.99 |
| Solyc02g063070.2.1 | Tomato | plastid | 78.02 | 81.92 |
| PGSC0003DMT400062153 | Potato | cytosol | 78.02 | 81.92 |
| KRH01783 | Soybean | nucleus | 76.92 | 81.71 |
| Bra001049.1-P | Field mustard | cytosol | 78.02 | 81.61 |
| Bra040592.1-P | Field mustard | cytosol | 77.66 | 81.23 |
| CDY51543 | Canola | cytosol | 77.66 | 81.23 |
| CDY28698 | Canola | cytosol | 77.29 | 80.84 |
| TraesCS2B01G344600.1 | Wheat | golgi | 77.66 | 80.61 |
| CDX91996 | Canola | cytosol | 76.92 | 80.46 |
| AT3G02520.2 | Thale cress | cytosol | 77.66 | 80.0 |
| Bra028409.1-P | Field mustard | cytosol | 75.46 | 79.84 |
| Zm00001d048554_P001 | Maize | cytosol | 57.51 | 79.7 |
| CDX67405 | Canola | cytosol | 75.09 | 79.46 |
| Bra028187.1-P | Field mustard | cytosol | 74.73 | 79.38 |
| CDX74521 | Canola | cytosol | 74.73 | 79.38 |
| AT5G38480.1 | Thale cress | cytosol | 73.99 | 79.22 |
| CDY71290 | Canola | cytosol | 74.36 | 78.99 |
| CDY01659 | Canola | cytosol | 74.36 | 78.99 |
| KRH46909 | Soybean | cytosol | 74.73 | 78.46 |
| PGSC0003DMT400050389 | Potato | cytosol | 74.36 | 78.08 |
| Zm00001d021885_P001 | Maize | mitochondrion | 46.52 | 76.97 |
| AT5G16050.2 | Thale cress | cytosol | 75.46 | 76.87 |
| Zm00001d033357_P001 | Maize | cytosol | 57.14 | 74.64 |
| TraesCS7B01G183800.1 | Wheat | plastid | 71.06 | 74.33 |
| Zm00001d007968_P001 | Maize | cytosol | 56.41 | 73.68 |
| Zm00001d017434_P001 | Maize | cytosol | 56.41 | 73.68 |
| TraesCS3B01G068000.1 | Wheat | cytosol | 75.82 | 73.4 |
| HORVU4Hr1G031770.1 | Barley | cytosol, plastid | 41.03 | 65.5 |
| Zm00001d018856_P001 | Maize | cytosol, plastid | 60.81 | 54.97 |
| TraesCS4B01G148900.2 | Wheat | cytosol | 47.62 | 52.21 |
| Zm00001d039042_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 61.54 | 41.28 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G159900.1 | EnsemblPlantsGene:TraesCS4B01G159900 | Gene3D:1.20.190.20 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0019904 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | InterPro:IPR036815 |
| ncoils:Coil | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF34 | PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 |
| ScanProsite:PS00796 | ScanProsite:PS00797 | SMART:SM00101 | SUPFAM:SSF48445 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4B:+:310973679..310976472
Molecular Weight (calculated)
30223.4 Da
IEP (calculated)
4.468
GRAVY (calculated)
-0.471
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPAEPTRDE SVYMAKLAEQ AERYEEMVEF MERVAKATGG AGPGEELSVE ERNLLSVAYK NVIGARRASW RIISSIEQKE EGRGNDAHAA TIRSYRSKIE
101: AELAKICDGI LALLDSHLVP SAGAAESKVF YLKMKGDYHR YLAEFKSGGE RKEAAESTMN AYKAAQDIAL ADLAPTHPIR LGLALNFSVF YYEILNSPDR
201: ACNLAKQAFD EAISELDSLG EESYKDSTLI MQLLRDNLTL WTSDTNCFYP TSQEDDVDEI KEAPAPKESG DGQ
101: AELAKICDGI LALLDSHLVP SAGAAESKVF YLKMKGDYHR YLAEFKSGGE RKEAAESTMN AYKAAQDIAL ADLAPTHPIR LGLALNFSVF YYEILNSPDR
201: ACNLAKQAFD EAISELDSLG EESYKDSTLI MQLLRDNLTL WTSDTNCFYP TSQEDDVDEI KEAPAPKESG DGQ
001: MAAPPASSSA REEFVYLAKL AEQAERYEEM VEFMEKVAEA VDKDELTVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE SRGNDDHVTT IRDYRSKIES
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
Arabidopsis Description
GF14 PHIGF14 protein phi chain [Source:UniProtKB/TrEMBL;Acc:F4HWQ5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.