Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74521 | Canola | cytosol | 99.61 | 99.61 |
| Bra028187.1-P | Field mustard | cytosol | 98.83 | 98.83 |
| CDY71290 | Canola | cytosol | 94.94 | 94.94 |
| CDX67405 | Canola | cytosol | 94.94 | 94.57 |
| AT5G38480.1 | Thale cress | cytosol | 93.39 | 94.12 |
| KRH01783 | Soybean | nucleus | 87.94 | 87.94 |
| CDY51543 | Canola | cytosol | 88.33 | 86.97 |
| Solyc03g034180.2.1 | Tomato | cytosol | 87.16 | 86.82 |
| CDY28698 | Canola | cytosol | 87.94 | 86.59 |
| CDX91996 | Canola | cytosol | 87.55 | 86.21 |
| GSMUA_Achr5P23090_001 | Banana | cytosol | 43.97 | 85.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.58 | 85.5 |
| VIT_14s0006g03230.t01 | Wine grape | cytosol | 87.16 | 85.5 |
| PGSC0003DMT400062153 | Potato | cytosol | 86.38 | 85.38 |
| CDX74252 | Canola | cytosol | 86.38 | 85.06 |
| Solyc02g063070.2.1 | Tomato | plastid | 85.99 | 85.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.58 | 84.85 |
| TraesCS4A01G268700.1 | Wheat | cytosol | 84.05 | 82.76 |
| TraesCS4B01G045500.2 | Wheat | cytosol | 84.05 | 82.76 |
| TraesCS4D01G046400.2 | Wheat | golgi | 84.05 | 82.76 |
| HORVU4Hr1G007370.1 | Barley | plasma membrane | 84.05 | 82.76 |
| KRH46909 | Soybean | cytosol | 83.66 | 82.69 |
| Os03t0710800-01 | Rice | nucleus, plasma membrane | 83.27 | 82.31 |
| PGSC0003DMT400050389 | Potato | cytosol | 82.88 | 81.92 |
| CDX68022 | Canola | cytosol | 81.32 | 80.38 |
| CDX79255 | Canola | cytosol | 81.32 | 80.38 |
| CDY14618 | Canola | cytosol | 81.32 | 80.38 |
| CDX88436 | Canola | cytosol | 81.32 | 80.38 |
| CDY12024 | Canola | cytosol | 80.54 | 79.31 |
| CDY28408 | Canola | cytosol | 79.77 | 77.95 |
| CDX73313 | Canola | cytosol | 79.77 | 77.36 |
| Os11t0546900-01 | Rice | plasma membrane | 79.77 | 77.36 |
| OQU83613 | Sorghum | cytosol | 79.77 | 77.07 |
| CDX85759 | Canola | cytosol | 73.93 | 76.61 |
| CDY40098 | Canola | cytosol | 73.93 | 76.61 |
| Zm00001d053090_P001 | Maize | plastid | 79.77 | 76.49 |
| CDY41483 | Canola | cytosol | 77.04 | 76.45 |
| TraesCS4D01G155900.1 | Wheat | plastid | 78.6 | 75.94 |
| CDX91676 | Canola | cytosol | 76.26 | 75.68 |
| CDX81287 | Canola | cytosol | 73.15 | 75.5 |
| CDY54716 | Canola | cytosol | 72.76 | 75.1 |
| TraesCS4A01G151000.2 | Wheat | cytosol | 78.6 | 74.81 |
| CDY00447 | Canola | cytosol | 75.49 | 74.62 |
| CDY14562 | Canola | cytosol | 71.98 | 74.6 |
| TraesCS4B01G159900.1 | Wheat | cytosol | 78.99 | 74.36 |
| Zm00001d007446_P003 | Maize | cytosol | 79.77 | 74.28 |
| CDY46646 | Canola | cytosol | 75.1 | 74.23 |
| CDY08794 | Canola | cytosol | 71.6 | 74.19 |
| CDX78381 | Canola | cytosol | 71.98 | 74.0 |
| CDX81179 | Canola | cytosol | 71.98 | 74.0 |
| CDX97016 | Canola | cytosol | 63.03 | 71.05 |
| Zm00001d048554_P001 | Maize | cytosol | 53.31 | 69.54 |
| CDX87455 | Canola | cytosol | 80.16 | 68.9 |
| CDY69181 | Canola | cytosol | 67.32 | 68.38 |
| HORVU4Hr1G043300.1 | Barley | cytosol | 79.38 | 68.0 |
| CDY38227 | Canola | cytosol | 66.93 | 67.98 |
| CDY16161 | Canola | cytosol | 68.87 | 65.8 |
| CDX85023 | Canola | cytosol | 68.87 | 65.56 |
| Zm00001d021885_P001 | Maize | mitochondrion | 42.02 | 65.45 |
| Zm00001d033357_P001 | Maize | cytosol | 52.92 | 65.07 |
| Zm00001d017434_P001 | Maize | cytosol | 52.14 | 64.11 |
| Zm00001d007968_P001 | Maize | cytosol | 52.14 | 64.11 |
| CDY40251 | Canola | cytosol | 60.7 | 63.67 |
| CDY61201 | Canola | cytosol | 65.76 | 62.13 |
| CDY42826 | Canola | cytosol | 64.98 | 61.62 |
| CDY48771 | Canola | cytosol | 42.41 | 59.89 |
| CDY20560 | Canola | cytosol | 60.7 | 58.43 |
| CDY61631 | Canola | cytosol | 68.87 | 53.96 |
| CDY24128 | Canola | cytosol | 68.48 | 53.66 |
| CDY56386 | Canola | mitochondrion | 39.3 | 51.27 |
| CDY52206 | Canola | mitochondrion | 39.3 | 51.27 |
| CDX91673 | Canola | cytosol | 52.92 | 50.56 |
| HORVU4Hr1G031770.1 | Barley | cytosol, plastid | 33.46 | 50.29 |
| Zm00001d018856_P001 | Maize | cytosol, plastid | 57.59 | 49.01 |
| CDX87464 | Canola | cytosol | 38.13 | 46.23 |
| CDX88428 | Canola | cytosol | 42.8 | 45.64 |
| CDX97014 | Canola | cytosol, plastid | 19.07 | 44.55 |
| CDY03135 | Canola | cytosol | 61.48 | 40.1 |
| Zm00001d039042_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 58.37 | 36.85 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| GO:A0A078ELN9 | EnsemblPlants:CDY01659 | ProteinID:CDY01659 | ProteinID:CDY01659.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | EnsemblPlantsGene:GSBRNA2T00112729001 | InterPro:IPR036815 | PFAM:PF00244 |
| PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF40 |
| SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI00018C7071 | : | : | : |
Description
BnaC04g30930D
Coordinates
chrLK031928:-:196253..197939
Molecular Weight (calculated)
28849.0 Da
IEP (calculated)
4.449
GRAVY (calculated)
-0.411
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSREVNVYM AKLAEQAERY EEMVEFMEKV AKTVDSEELT VEERNLLSVA YKNVIGARRA SWRIISSIEQ KEESKGNEEH VAIIKEYRGK IETELSKICD
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG DERKDAAEST LVAYKSAQDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACTLAKQA
201: FDEAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PEGGAAE
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG DERKDAAEST LVAYKSAQDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACTLAKQA
201: FDEAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PEGGAAE
001: MSTREENVYM AKLAEQAERY EEMVEFMEKV AKTVDVEELS VEERNLLSVA YKNVIGARRA SWRIISSIEQ KEESKGNEDH VAIIKDYRGK IESELSKICD
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG AERKEAAEST LVAYKSASDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACSLAKQA
201: FDDAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PDGAE
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG AERKEAAEST LVAYKSASDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACSLAKQA
201: FDDAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PDGAE
Arabidopsis Description
GRF3RCI1 [Source:UniProtKB/TrEMBL;Acc:A0A178UA42]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.