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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
nucleus: 16766513
nucleus: 15276429
plasma membrane: 18260611
plastid: 21433289
nucleus: 23777608
extracellular: 26072143
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797
extracellular: 28232208
gfp PMID: 16766513 doi
F Chen, Q Li, L Sun, Z He
National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, The Chinese Academy of Sciences 300 Fenglin Road, Shanghai 200032, China.
msms PMID: 26072143 doi
B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID: 23777608 doi
H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 15276429 doi
MM Khan, S Komatsu
Department of Molecular Genetics, National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba 305-8602, Japan.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 21433289 doi
S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os08t0242900-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G38480.1 Os08t0242900-01 AT2G18876.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G046400.2 Wheat golgi 96.92 96.55
TraesCS4B01G045500.2 Wheat cytosol 96.92 96.55
TraesCS4A01G268700.1 Wheat cytosol 96.92 96.55
HORVU4Hr1G007370.1 Barley plasma membrane 96.92 96.55
Solyc03g034180.2.1 Tomato cytosol 86.54 87.21
GSMUA_Achr7P10320_001 Banana cytosol 44.23 87.12
GSMUA_Achr2P16070_001 Banana cytosol 44.23 87.12
Os08t0430500-02 Rice plasma membrane 85.77 87.11
CDY51543 Canola cytosol 86.54 86.21
Bra040592.1-P Field mustard cytosol 86.54 86.21
CDY28698 Canola cytosol 86.15 85.82
Solyc02g063070.2.1 Tomato plastid 85.77 85.77
PGSC0003DMT400062153 Potato cytosol 85.77 85.77
KRH01783 Soybean nucleus 84.62 85.6
Os02t0580300-02 Rice plasma membrane 86.15 85.5
Bra001049.1-P Field mustard cytosol 85.0 84.67
VIT_14s0006g03230.t01 Wine grape cytosol 85.0 84.35
AT5G38480.1 Thale cress cytosol 82.69 84.31
CDX74252 Canola cytosol 84.62 84.29
Os04t0462500-02 Rice cytosol 84.62 83.97
CDX91996 Canola cytosol 84.23 83.91
PGSC0003DMT400050389 Potato cytosol 83.85 83.85
Bra028187.1-P Field mustard cytosol 82.69 83.66
CDX74521 Canola cytosol 82.69 83.66
AT3G02520.2 Thale cress cytosol 85.0 83.4
CDY01659 Canola cytosol 82.31 83.27
CDX67405 Canola cytosol 81.92 82.56
Bra028409.1-P Field mustard cytosol 81.54 82.17
CDY71290 Canola cytosol 81.15 82.1
KRH46909 Soybean cytosol 81.54 81.54
Os11t0546900-01 Rice plasma membrane 82.69 81.13
AT5G16050.2 Thale cress cytosol 81.54 79.1
Os08t0480800-01 Rice plasma membrane 74.23 73.11
Os01t0209200-01 Rice cytosol, extracellular, nucleus 59.62 60.31
Os11t0609600-01 Rice cytosol 26.54 34.5
Protein Annotations
Gene3D:1.20.190.20InterPro:14-3-3InterPro:14-3-3_CSInterPro:14-3-3_dom_sfInterPro:14-3-3_domainMapMan:35.1
EntrezGene:4333880ProteinID:AAX95656.1ProteinID:ABF98505.1ProteinID:ABF98506.1ProteinID:ABF98507.1EMBL:AK062077
EMBL:AK103065ProteinID:BAF12965.1ProteinID:BAS86016.1ncoils:CoilEMBL:D16140ProteinID:EAZ28334.1
EMBL:EU268000GO:GO:0000077GO:GO:0003674GO:GO:0003824GO:GO:0004623GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737
GO:GO:0006464GO:GO:0006588GO:GO:0006950GO:GO:0007049GO:GO:0008150GO:GO:0008152
GO:GO:0008426GO:GO:0009058GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0019904
GO:GO:0030234GO:GO:0071901InterPro:IPR036815EMBL:KC140113EnsemblPlantsGene:Os03g0710800EnsemblPlants:Os03t0710800-01
PFAM:PF00244PIRSF:PIRSF000868PRINTS:PR00305ScanProsite:PS00796ScanProsite:PS00797PANTHER:PTHR18860
PANTHER:PTHR18860:SF40UniProt:Q06967SMART:SM00101SUPFAM:SSF48445UniParc:UPI00000A4F34RefSeq:XP_015631133.1
RefSeq:XP_015631134.1:::::
Description
G-BOX FACTOR 14-3-3F PROTEIN14-3-3-like protein S94. (Os03t0710800-01)
Coordinates
chr3:+:28664068..28667703
Molecular Weight (calculated)
29179.3 Da
IEP (calculated)
4.523
GRAVY (calculated)
-0.467
Length
260 amino acids
Sequence
(BLAST)
001: MSPAEASREE NVYMAKLAEQ AERYEEMVEF MEKVAKTTDV GELTVEERNL LSVAYKNVIG ARRASWRIIS SIEQKEESRG NEAYVASIKE YRSRIETELS
101: KICDGILKLL DSHLVPSATA AESKVFYLKM KGDYHRYLAE FKSGAERKEA AENTLVAYKS AQDIALADLP TTHPIRLGLA LNFSVFYYEI LNSPDRACNL
201: AKQAFDDAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD NAEDGGDEIK EAAKPEGEGH
Best Arabidopsis Sequence Match ( AT3G02520.2 )
(BLAST)
001: MSSSREENVY LAKLAEQAER YEEMVEFMEK VAKTVDTDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVSIIKDYRG KIETELSKIC
101: DGILNLLDSH LVPTASLAES KVFYLKMKGD YHRYLAEFKT GAERKEAAES TLVAYKSAQD IALADLAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDEAISELD TLGEESYKDS TLIMQLLRDN LTLWNSDIND EAGGDEIKEA SKHEPEEGKP AETGQ
Arabidopsis Description
GRF714-3-3-like protein GF14 nu [Source:UniProtKB/Swiss-Prot;Acc:Q96300]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.