Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
29385242
|
msms PMID:
29385242
doi
Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU7Hr1G060360.1 | |
| HORVU7Hr1G060410.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G38480.1 | HORVU7Hr1G060360.1 | AT2G18876.1 | 21798944 |
| AT5G38480.1 | HORVU7Hr1G060410.1 | AT2G18876.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G046400.2 | Wheat | golgi | 100.0 | 100.0 |
| TraesCS4B01G045500.2 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS4A01G268700.1 | Wheat | cytosol | 100.0 | 100.0 |
| Os03t0710800-01 | Rice | nucleus, plasma membrane | 96.55 | 96.92 |
| Bra040592.1-P | Field mustard | cytosol | 86.59 | 86.59 |
| CDY51543 | Canola | cytosol | 86.59 | 86.59 |
| GSMUA_Achr7P10320_001 | Banana | cytosol | 43.68 | 86.36 |
| GSMUA_Achr2P16070_001 | Banana | cytosol | 43.68 | 86.36 |
| CDY28698 | Canola | cytosol | 86.21 | 86.21 |
| Solyc03g034180.2.1 | Tomato | cytosol | 85.06 | 86.05 |
| Bra001049.1-P | Field mustard | cytosol | 85.44 | 85.44 |
| CDX74252 | Canola | cytosol | 85.06 | 85.06 |
| PGSC0003DMT400062153 | Potato | cytosol | 84.67 | 85.0 |
| Solyc02g063070.2.1 | Tomato | plastid | 84.67 | 85.0 |
| KRH01783 | Soybean | nucleus | 83.52 | 84.82 |
| CDX74521 | Canola | cytosol | 83.14 | 84.44 |
| Bra028187.1-P | Field mustard | cytosol | 83.14 | 84.44 |
| AT5G38480.1 | Thale cress | cytosol | 82.38 | 84.31 |
| CDX91996 | Canola | cytosol | 84.29 | 84.29 |
| CDY01659 | Canola | cytosol | 82.76 | 84.05 |
| VIT_14s0006g03230.t01 | Wine grape | cytosol | 83.91 | 83.59 |
| AT3G02520.2 | Thale cress | cytosol | 84.67 | 83.4 |
| CDX67405 | Canola | cytosol | 81.99 | 82.95 |
| PGSC0003DMT400050389 | Potato | cytosol | 82.38 | 82.69 |
| Bra028409.1-P | Field mustard | cytosol | 81.61 | 82.56 |
| CDY71290 | Canola | cytosol | 81.23 | 82.49 |
| HORVU2Hr1G080630.1 | Barley | cytosol | 82.76 | 82.13 |
| KRH46909 | Soybean | cytosol | 80.84 | 81.15 |
| AT5G16050.2 | Thale cress | cytosol | 81.23 | 79.1 |
| HORVU0Hr1G004990.4 | Barley | cytosol | 68.2 | 74.48 |
| HORVU4Hr1G043300.1 | Barley | cytosol | 84.29 | 73.33 |
| HORVU4Hr1G031770.1 | Barley | cytosol, plastid | 35.25 | 53.8 |
| HORVU4Hr1G031620.11 | Barley | cytosol | 49.04 | 47.41 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| EMBL:AK354203 | ncoils:Coil | UniProt:F2CRF1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008426 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0019904 | GO:GO:0030234 | GO:GO:0071901 | EnsemblPlantsGene:HORVU4Hr1G007370 | EnsemblPlants:HORVU4Hr1G007370.1 | InterPro:IPR036815 |
| PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 |
| PANTHER:PTHR18860:SF40 | SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI000016DDBA | : | : |
Description
14-3-3-like protein A [Source:UniProtKB/TrEMBL;Acc:F2CRF1]
Coordinates
chrchr4H:+:19180798..19184008
Molecular Weight (calculated)
29266.4 Da
IEP (calculated)
4.531
GRAVY (calculated)
-0.445
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTAEATREE NVYMAKLAEQ AERYEEMVEF MEKVAKTADV GELTVEERNL LSVAYKNVIG ARRASWRIIS SIEQKEESRG NEAYVASIKE YRTRIETELS
101: KICDGILKLL DSHLVPSATA AESKVFYLKM KGDYHRYLAE FKAGAERKEA AENTLVAYKS AQDIALADLP TTHPIRLGLA LNFSVFYYEI LNSPDRACNL
201: AKQAFDEAIA ELDSLGEESY KDSTLIMQLL RDNLTLWTSD NAEEGGDEIK EAASKPEGEG H
101: KICDGILKLL DSHLVPSATA AESKVFYLKM KGDYHRYLAE FKAGAERKEA AENTLVAYKS AQDIALADLP TTHPIRLGLA LNFSVFYYEI LNSPDRACNL
201: AKQAFDEAIA ELDSLGEESY KDSTLIMQLL RDNLTLWTSD NAEEGGDEIK EAASKPEGEG H
001: MSTREENVYM AKLAEQAERY EEMVEFMEKV AKTVDVEELS VEERNLLSVA YKNVIGARRA SWRIISSIEQ KEESKGNEDH VAIIKDYRGK IESELSKICD
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG AERKEAAEST LVAYKSASDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACSLAKQA
201: FDDAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PDGAE
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG AERKEAAEST LVAYKSASDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACSLAKQA
201: FDDAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PDGAE
Arabidopsis Description
GRF3RCI1 [Source:UniProtKB/TrEMBL;Acc:A0A178UA42]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.