Factsheet for HORVU7Hr1G060360.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G060360.1
HORVU7Hr1G060410.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18876.1	HORVU7Hr1G060360.1	AT2G18876.1	21798944
AT2G18876.1	HORVU7Hr1G060410.1	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G292000.1	Wheat	cytosol, nucleus, plastid	94.96	83.12
TraesCS7D01G288000.2	Wheat	cytosol, nucleus, plastid	95.55	82.14
TraesCS7B01G183000.7	Wheat	cytosol, nucleus, plastid	95.25	81.68
Zm00001d050216_P003	Maize	plastid	87.24	75.58
KXG24799	Sorghum	mitochondrion, plastid	87.24	75.58
Os08t0242900-01	Rice	nucleus	88.43	74.87
GSMUA_Achr7P05020_001	Banana	cytosol	79.53	71.09
GSMUA_Achr4P20560_001	Banana	cytosol	80.42	70.21
Bra006821.1-P	Field mustard	cytosol	72.11	66.94
KRH02865	Soybean	cytosol	74.48	66.4
KRH19028	Soybean	cytosol	74.18	66.14
CDX88621	Canola	cytosol	72.11	65.5
CDY11870	Canola	cytosol	71.81	65.23
VIT_11s0052g00890.t01	Wine grape	cytosol	73.89	65.18
Solyc07g019530.2.1	Tomato	cytosol	74.18	64.43
CDY52581	Canola	nucleus	68.25	62.84
AT5G57410.3	Thale cress	cytosol	72.4	62.4
Bra020441.1-P	Field mustard	cytosol	17.51	62.11
AT2G18876.1	Thale cress	cytosol	68.25	60.21
CDY30300	Canola	nucleus	67.95	59.02
Bra038553.1-P	Field mustard	nucleus	67.95	58.72
CDY52582	Canola	nucleus	11.57	54.93
CDY61500	Canola	cytosol	17.51	40.41
KRH13062	Soybean	cytosol	14.54	39.52
KRH38497	Soybean	cytosol	7.42	30.49
HORVU7Hr1G060410.1	Barley	cytosol	0.59	3.08

Protein Annotations

EnsemblPlants:HORVU7Hr1G060360.1	EnsemblPlantsGene:HORVU7Hr1G060360	InterPro:Afadin/alpha-actinin-bd	ncoils:Coil	PANTHER:PTHR21736	PANTHER:PTHR21736:SF12
PFAM:PF11559	UniParc:UPI000B464E4C	UniProt:A0A287WNJ2	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr7H:+:277029263..277035969

Molecular Weight (calculated)

38516.1 Da

IEP (calculated)

8.986

GRAVY (calculated)

-0.824

Length

337 amino acids

Sequence
(BLAST)

001: MTSLSSVGPQ VSIARTCNCM YALLQQRQRD IEFRESTNDL RQRMQSDISR LEAKIERMDA QLAAKDRELA TLTRTEAKNT AALKAHIEKL QQERDEFQKM
101: VIGNQQVRTQ QIHETKKKEK EYIKLQEKLN QVLMEKKKES SRSGMEIMNL LQKEGRQRGT WTGKKNDNDY YKMIVDAYEV KKQELVQENA DLRALLRSME
201: MDMRKFLNAP TGSSQAVVAG NGRQEAGSPQ PPLGGKTDVF DLPFHMARDQ IEESLRTKMA SVKARMTQLQ DAQKVAEVTS EVTERELELE AQLVEARSII
301: QEQASIMSKH FSKSDKPRRL SGLDAEHEAI HSASTDV

Best Arabidopsis Sequence Match ( AT5G57410.3 )
(BLAST)

001: MPANDAEYDL KVLSQSASAG DYTFANEDNL EHCTKYLNQT MVTFGFPASL DLFSNDPVSI SRTCNCMYSL LQQRQRDIEF RESANELRQR QQSDIARLEA
101: KVERLEALLQ QKDREIATIT RTEAKNTAAL KSQIEKLQQE RDEFQRMVIG NQQVKAQQIH EMKKKEKDYI KLQERLNQVL MEKKKESRSG MEIMNLLQKE
201: GRQRGTWNGK KTDTDFYKKI VDAYEAKNQE LMAENTSLRA LLRSMQTDMR DFLNAPNGSA TLAGSEKREA DPSQSPLGGK TDVFDLPYRM ARGQIEESLR
301: TKMASIKESM VQLQDAPKRA SVTSEATERE LELEAQLVEA RSIIQEQESI MSKHLPKSEQ RRESVASLAA EGLDNASSHA HMKSAPSLRL Y

Arabidopsis Description

Afadin/alpha-actinin-binding protein [Source:UniProtKB/TrEMBL;Acc:F4KAN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.