CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH02865
KRH05108
KRH13062
KRH19028
KRH38497

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18876.1	KRH05108	AT1G78300.1	21798944
AT2G18876.1	KRH02865	AT2G18876.1	21798944
AT2G18876.1	KRH13062	AT2G18876.1	21798944
AT2G18876.1	KRH19028	AT2G18876.1	21798944
AT2G18876.1	KRH38497	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G060410.1	Barley	cytosol	34.15	43.08
KRH13062	Soybean	cytosol	57.32	37.9
KRH19028	Soybean	cytosol	74.39	16.14
KRH02865	Soybean	cytosol	74.39	16.14
Bra006821.1-P	Field mustard	cytosol	64.63	14.6
CDY11870	Canola	cytosol	65.85	14.56
CDY52581	Canola	nucleus	64.63	14.48
CDX88621	Canola	cytosol	64.63	14.29
VIT_11s0052g00890.t01	Wine grape	cytosol	65.85	14.14
Solyc07g019530.2.1	Tomato	cytosol	65.85	13.92
GSMUA_Achr4P20560_001	Banana	cytosol	64.63	13.73
AT5G57410.3	Thale cress	cytosol	64.63	13.55
GSMUA_Achr7P05020_001	Banana	cytosol	62.2	13.53
Bra038553.1-P	Field mustard	nucleus	63.41	13.33
CDY30300	Canola	nucleus	62.2	13.14
AT2G18876.1	Thale cress	cytosol	59.76	12.83
TraesCS7D01G288000.2	Wheat	cytosol, nucleus, plastid	60.98	12.76
TraesCS7A01G292000.1	Wheat	cytosol, nucleus, plastid	59.76	12.73
TraesCS7B01G183000.7	Wheat	cytosol, nucleus, plastid	60.98	12.72
Os08t0242900-01	Rice	nucleus	60.98	12.56
Zm00001d050216_P003	Maize	plastid	57.32	12.08
KXG24799	Sorghum	mitochondrion, plastid	56.1	11.83
HORVU7Hr1G060360.1	Barley	plastid	30.49	7.42
CDY61500	Canola	cytosol	0.0	0.0
CDY52582	Canola	nucleus	0.0	0.0
Bra020441.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02005824	EnsemblPlants:KRH38497	EnsemblPlantsGene:GLYMA_09G140000	ProteinID:KRH38497	ProteinID:KRH38497.1	UniParc:UPI0006EDEFE2
UniProt:A0A0R0I897	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:34724251..34726625

Molecular Weight (calculated)

9579.5 Da

IEP (calculated)

5.807

GRAVY (calculated)

-0.388

Length

82 amino acids

Sequence
(BLAST)

1: MVTWILGEYM FADVENLEHY AKYLNQSLIT FGFPASLDLF TNDPWRSRLE GQLQVKDREI LTITRTVAKN SQTLKAQNEK LQ

Best Arabidopsis Sequence Match ( AT5G57410.1 )
(BLAST)

001: MPANDAEYDL KVLSQSASAG DYTFANEDNL EHCTKYLNQT MVTFGFPASL DLFSNDPVSI SRTCNCMYSL LQQRQRDIEF RESANELRQR QQSDIARLEA
101: KVERLEALLQ QKDREIATIT RTEAKNTAAL KSQIEKLQQE RDEFQRMVIG NQQVKAQQIH EMKKKEKDYI KLQERLNQVL MEKKKESRSG MEIMNLLQKE
201: GRQRGTWNGK KTDTDFYKKI VDAYEAKNQE LMAENTSLRA LLRSMQTDMR DFLNAPNGSA TLAGSEKREA DPSQSPLGGK TDVFDLPYRM ARGQIEESLR
301: TKMASIKESM VQLQDAPKRA SVTSEATERE LELEAQLVEA RSIIQEQESI MSKHLPKSEQ RRESVASLAA EGV

Arabidopsis Description

Afadin/alpha-actinin-binding protein [Source:UniProtKB/TrEMBL;Acc:F4KAN9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.