Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G18876.1 | KRH05108 | AT1G78300.1 | 21798944 |
| AT2G18876.1 | KRH02865 | AT2G18876.1 | 21798944 |
| AT2G18876.1 | KRH13062 | AT2G18876.1 | 21798944 |
| AT2G18876.1 | KRH19028 | AT2G18876.1 | 21798944 |
| AT2G18876.1 | KRH38497 | AT2G18876.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19028 | Soybean | cytosol | 98.41 | 98.41 |
| VIT_11s0052g00890.t01 | Wine grape | cytosol | 87.83 | 86.91 |
| Bra006821.1-P | Field mustard | cytosol | 77.78 | 80.99 |
| CDY11870 | Canola | cytosol | 79.37 | 80.86 |
| CDX88621 | Canola | cytosol | 79.1 | 80.59 |
| Solyc07g019530.2.1 | Tomato | cytosol | 80.95 | 78.87 |
| GSMUA_Achr7P05020_001 | Banana | cytosol | 77.51 | 77.72 |
| CDY52581 | Canola | nucleus | 75.13 | 77.6 |
| GSMUA_Achr4P20560_001 | Banana | cytosol | 78.84 | 77.2 |
| AT5G57410.3 | Thale cress | cytosol | 79.1 | 76.47 |
| KRH13062 | Soybean | cytosol | 24.87 | 75.81 |
| AT2G18876.1 | Thale cress | cytosol | 76.19 | 75.39 |
| Zm00001d050216_P003 | Maize | plastid | 76.98 | 74.81 |
| KXG24799 | Sorghum | mitochondrion, plastid | 76.72 | 74.55 |
| HORVU7Hr1G060360.1 | Barley | plastid | 66.4 | 74.48 |
| KRH38497 | Soybean | cytosol | 16.14 | 74.39 |
| TraesCS7A01G292000.1 | Wheat | cytosol, nucleus, plastid | 75.66 | 74.29 |
| CDY30300 | Canola | nucleus | 75.66 | 73.71 |
| TraesCS7D01G288000.2 | Wheat | cytosol, nucleus, plastid | 76.19 | 73.47 |
| Os08t0242900-01 | Rice | nucleus | 76.98 | 73.12 |
| Bra038553.1-P | Field mustard | nucleus | 75.4 | 73.08 |
| TraesCS7B01G183000.7 | Wheat | cytosol, nucleus, plastid | 75.66 | 72.77 |
| CDY52582 | Canola | nucleus | 12.17 | 64.79 |
| Bra020441.1-P | Field mustard | cytosol | 15.87 | 63.16 |
| HORVU7Hr1G060410.1 | Barley | cytosol | 10.05 | 58.46 |
| CDY61500 | Canola | cytosol | 16.4 | 42.47 |
Protein Annotations
| EMBL:ACUP02010328 | EnsemblPlants:KRH02865 | EnsemblPlantsGene:GLYMA_17G062900 | InterPro:Afadin/alpha-actinin-bd | ncoils:Coil | PANTHER:PTHR21736 |
| PANTHER:PTHR21736:SF12 | PFAM:PF11559 | ProteinID:KRH02865 | ProteinID:KRH02865.1 | SEG:seg | UniParc:UPI0001D65166 |
| UniProt:I1MSQ6 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:4839932..4845705
Molecular Weight (calculated)
43360.5 Da
IEP (calculated)
5.299
GRAVY (calculated)
-0.779
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPTDGDLDL RPPSQSSFTA GDYTFADADN LEHCAKYLNQ SLVTFGFPAS LDLFANDPVS IARTCNCIYV LLQQRQRDVE FRESANDQRQ RLLSDISRLE
101: AKVERLEGQL QVKDREIATI TRTEAKNTAA LKAQIEKLQQ ERDEFQRMVI GNQQVKTQQM HEMKKKEKEY IKLQERLNQV LMEKKKESRS GMEIMNLLQK
201: EGRQRGTWNG KKADNDFYKK IVDAYESKNQ ELMAENADLR ALLRSMQVDM RDFLNAPNGL PKQSFTGNER VESDPSQSPL VGKMDVFDLP FHMARDQIEE
301: SLRNKMASIK ERMVQLQDAQ KEAEVTSEAT ERELELEAQL VEARSIIQEQ ASIMSKHLAK SDRPRESIIP APAEAVCN
101: AKVERLEGQL QVKDREIATI TRTEAKNTAA LKAQIEKLQQ ERDEFQRMVI GNQQVKTQQM HEMKKKEKEY IKLQERLNQV LMEKKKESRS GMEIMNLLQK
201: EGRQRGTWNG KKADNDFYKK IVDAYESKNQ ELMAENADLR ALLRSMQVDM RDFLNAPNGL PKQSFTGNER VESDPSQSPL VGKMDVFDLP FHMARDQIEE
301: SLRNKMASIK ERMVQLQDAQ KEAEVTSEAT ERELELEAQL VEARSIIQEQ ASIMSKHLAK SDRPRESIIP APAEAVCN
001: MPANDAEYDL KVLSQSASAG DYTFANEDNL EHCTKYLNQT MVTFGFPASL DLFSNDPVSI SRTCNCMYSL LQQRQRDIEF RESANELRQR QQSDIARLEA
101: KVERLEALLQ QKDREIATIT RTEAKNTAAL KSQIEKLQQE RDEFQRMVIG NQQVKAQQIH EMKKKEKDYI KLQERLNQVL MEKKKESRSG MEIMNLLQKE
201: GRQRGTWNGK KTDTDFYKKI VDAYEAKNQE LMAENTSLRA LLRSMQTDMR DFLNAPNGSA TLAGSEKREA DPSQSPLGGK TDVFDLPYRM ARGQIEESLR
301: TKMASIKESM VQLQDAPKRA SVTSEATERE LELEAQLVEA RSIIQEQESI MSKHLPKSEQ RRESVASLAA EGV
101: KVERLEALLQ QKDREIATIT RTEAKNTAAL KSQIEKLQQE RDEFQRMVIG NQQVKAQQIH EMKKKEKDYI KLQERLNQVL MEKKKESRSG MEIMNLLQKE
201: GRQRGTWNGK KTDTDFYKKI VDAYEAKNQE LMAENTSLRA LLRSMQTDMR DFLNAPNGSA TLAGSEKREA DPSQSPLGGK TDVFDLPYRM ARGQIEESLR
301: TKMASIKESM VQLQDAPKRA SVTSEATERE LELEAQLVEA RSIIQEQESI MSKHLPKSEQ RRESVASLAA EGV
Arabidopsis Description
Afadin/alpha-actinin-binding protein [Source:UniProtKB/TrEMBL;Acc:F4KAN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.