Factsheet for AT5G57410.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006821.1-P	Field mustard	cytosol	84.14	90.63
CDX88621	Canola	cytosol	85.42	90.03
CDY11870	Canola	cytosol	85.42	90.03
KRH02865	Soybean	cytosol	76.47	79.1
KRH19028	Soybean	cytosol	76.47	79.1
VIT_11s0052g00890.t01	Wine grape	cytosol	75.7	77.49
Solyc07g019530.2.1	Tomato	cytosol	73.66	74.23
Bra020441.1-P	Field mustard	cytosol	17.9	73.68
GSMUA_Achr7P05020_001	Banana	cytosol	70.59	73.21
GSMUA_Achr4P20560_001	Banana	cytosol	72.12	73.06
HORVU7Hr1G060360.1	Barley	plastid	62.4	72.4
AT2G18876.1	Thale cress	cytosol	70.59	72.25
Zm00001d050216_P003	Maize	plastid	71.1	71.47
KXG24799	Sorghum	mitochondrion, plastid	71.1	71.47
TraesCS7A01G292000.1	Wheat	cytosol, nucleus, plastid	70.33	71.43
TraesCS7D01G288000.2	Wheat	cytosol, nucleus, plastid	70.84	70.66
TraesCS7B01G183000.7	Wheat	cytosol, nucleus, plastid	70.59	70.23
Os08t0242900-01	Rice	nucleus	70.84	69.6
KRH38497	Soybean	cytosol	13.55	64.63
KRH13062	Soybean	cytosol	20.2	63.71
CDY61500	Canola	cytosol	19.18	51.37
HORVU7Hr1G060410.1	Barley	cytosol	8.18	49.23

Protein Annotations

MapMan:35.2	EntrezGene:835847	ProteinID:AED96900.1	ArrayExpress:AT5G57410	EnsemblPlantsGene:AT5G57410	RefSeq:AT5G57410
TAIR:AT5G57410	RefSeq:AT5G57410-TAIR-G	EnsemblPlants:AT5G57410.3	TAIR:AT5G57410.3	InterPro:Afadin/alpha-actinin-bd	ncoils:Coil
UniProt:F4KAN9	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005875
GO:GO:0008150	GO:GO:0046686	RefSeq:NP_001190560.1	PFAM:PF11559	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PANTHER:PTHR21736	PANTHER:PTHR21736:SF12	UniParc:UPI0001E930D8	:

Description

Afadin/alpha-actinin-binding protein [Source:UniProtKB/TrEMBL;Acc:F4KAN9]

Coordinates

chr5:-:23264314..23267883

Molecular Weight (calculated)

44642.9 Da

IEP (calculated)

6.701

GRAVY (calculated)

-0.828

Length

391 amino acids

Sequence
(BLAST)

001: MPANDAEYDL KVLSQSASAG DYTFANEDNL EHCTKYLNQT MVTFGFPASL DLFSNDPVSI SRTCNCMYSL LQQRQRDIEF RESANELRQR QQSDIARLEA
101: KVERLEALLQ QKDREIATIT RTEAKNTAAL KSQIEKLQQE RDEFQRMVIG NQQVKAQQIH EMKKKEKDYI KLQERLNQVL MEKKKESRSG MEIMNLLQKE
201: GRQRGTWNGK KTDTDFYKKI VDAYEAKNQE LMAENTSLRA LLRSMQTDMR DFLNAPNGSA TLAGSEKREA DPSQSPLGGK TDVFDLPYRM ARGQIEESLR
301: TKMASIKESM VQLQDAPKRA SVTSEATERE LELEAQLVEA RSIIQEQESI MSKHLPKSEQ RRESVASLAA EGLDNASSHA HMKSAPSLRL Y

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.