Factsheet for Bra006821.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88621	Canola	cytosol	97.25	95.15
AT5G57410.3	Thale cress	cytosol	90.63	84.14
Bra020441.1-P	Field mustard	cytosol	20.66	78.95
KRH02865	Soybean	cytosol	80.99	77.78
KRH19028	Soybean	cytosol	80.72	77.51
VIT_11s0052g00890.t01	Wine grape	cytosol	80.99	76.96
Solyc07g019530.2.1	Tomato	cytosol	77.96	72.94
GSMUA_Achr7P05020_001	Banana	cytosol	75.48	72.68
HORVU7Hr1G060360.1	Barley	plastid	66.94	72.11
TraesCS7A01G292000.1	Wheat	cytosol, nucleus, plastid	76.03	71.69
GSMUA_Achr4P20560_001	Banana	cytosol	76.03	71.5
KXG24799	Sorghum	mitochondrion, plastid	76.31	71.21
Zm00001d050216_P003	Maize	plastid	76.03	70.95
TraesCS7D01G288000.2	Wheat	cytosol, nucleus, plastid	76.58	70.92
TraesCS7B01G183000.7	Wheat	cytosol, nucleus, plastid	76.31	70.48
Os08t0242900-01	Rice	nucleus	75.76	69.1
Bra038553.1-P	Field mustard	nucleus	73.55	68.46
KRH38497	Soybean	cytosol	14.6	64.63
KRH13062	Soybean	cytosol	21.49	62.9
HORVU7Hr1G060410.1	Barley	cytosol	8.82	49.23

Protein Annotations

EnsemblPlants:Bra006821.1	EnsemblPlants:Bra006821.1-P	EnsemblPlantsGene:Bra006821	InterPro:Afadin/alpha-actinin-bd	ncoils:Coil	PANTHER:PTHR21736
PANTHER:PTHR21736:SF12	PFAM:PF11559	SEG:seg	UniParc:UPI000253FCA7	UniProt:M4CRI0	MapMan:35.2

Description

AT5G57410 (E=2e-176) | unknown protein

Coordinates

chrA03:+:5196569..5198908

Molecular Weight (calculated)

41932.2 Da

IEP (calculated)

8.557

GRAVY (calculated)

-0.828

Length

363 amino acids

Sequence
(BLAST)

001: MILCVCWYLR RDYTFANVDN LEHCAKYLNQ TMVTFGFPAS LDLFSKDPVS ISRTCNCMYS LLQQRQRDLE FRESANELRQ RQQSDIARLE AKVERLDAQL
101: QHKDREIATI TRTEAKNTAA LKSQIEKLQQ ERDEFQRMVI GNQQVKAQQI HEMKKKEKDY IKLQERLNQV LMEKKKESKS GMEIMNLLQK EGRQRGTWNG
201: KKTDTDFYKK IVDAYEAKNQ ELMAENTNLR ALLRSMQTDM RDFLNAPNGS ANPSLAGNEK READPSQSPL GGKTDVFDLP FRMARGQIEE SLRTKMASIK
301: ERMVQLQDAP KGASVTSEAT ERELELEAQL VEARSIIQEQ ESIMCKHLPK SEQRKGIHGS IDS

Best Arabidopsis Sequence Match ( AT5G57410.1 )
(BLAST)

001: MPANDAEYDL KVLSQSASAG DYTFANEDNL EHCTKYLNQT MVTFGFPASL DLFSNDPVSI SRTCNCMYSL LQQRQRDIEF RESANELRQR QQSDIARLEA
101: KVERLEALLQ QKDREIATIT RTEAKNTAAL KSQIEKLQQE RDEFQRMVIG NQQVKAQQIH EMKKKEKDYI KLQERLNQVL MEKKKESRSG MEIMNLLQKE
201: GRQRGTWNGK KTDTDFYKKI VDAYEAKNQE LMAENTSLRA LLRSMQTDMR DFLNAPNGSA TLAGSEKREA DPSQSPLGGK TDVFDLPYRM ARGQIEESLR
301: TKMASIKESM VQLQDAPKRA SVTSEATERE LELEAQLVEA RSIIQEQESI MSKHLPKSEQ RRESVASLAA EGV

Arabidopsis Description

Afadin/alpha-actinin-binding protein [Source:UniProtKB/TrEMBL;Acc:F4KAN9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.