Factsheet for HORVU7Hr1G060410.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G060360.1
HORVU7Hr1G060410.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18876.1	HORVU7Hr1G060360.1	AT2G18876.1	21798944
AT2G18876.1	HORVU7Hr1G060410.1	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38497	Soybean	cytosol	43.08	34.15
KRH13062	Soybean	cytosol	46.15	24.19
TraesCS7D01G288000.2	Wheat	cytosol, nucleus, plastid	98.46	16.33
TraesCS7B01G183000.7	Wheat	cytosol, nucleus, plastid	75.38	12.47
TraesCS7A01G292000.1	Wheat	cytosol, nucleus, plastid	67.69	11.43
Zm00001d050216_P003	Maize	plastid	67.69	11.31
KXG24799	Sorghum	mitochondrion, plastid	67.69	11.31
Os08t0242900-01	Rice	nucleus	66.15	10.8
KRH02865	Soybean	cytosol	58.46	10.05
Solyc07g019530.2.1	Tomato	cytosol	58.46	9.79
VIT_11s0052g00890.t01	Wine grape	cytosol	56.92	9.69
GSMUA_Achr7P05020_001	Banana	cytosol	55.38	9.55
KRH19028	Soybean	cytosol	55.38	9.52
GSMUA_Achr4P20560_001	Banana	cytosol	55.38	9.33
CDY11870	Canola	cytosol	52.31	9.16
CDY52581	Canola	nucleus	50.77	9.02
AT2G18876.1	Thale cress	cytosol	52.31	8.9
CDX88621	Canola	cytosol	50.77	8.89
Bra006821.1-P	Field mustard	cytosol	49.23	8.82
Bra038553.1-P	Field mustard	nucleus	50.77	8.46
CDY30300	Canola	nucleus	49.23	8.25
AT5G57410.3	Thale cress	cytosol	49.23	8.18
HORVU7Hr1G060360.1	Barley	plastid	3.08	0.59
CDY61500	Canola	cytosol	0.0	0.0
CDY52582	Canola	nucleus	0.0	0.0
Bra020441.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU7Hr1G060410.1

EnsemblPlantsGene:HORVU7Hr1G060410

UniParc:UPI000B45F99E

UniProt:A0A287WNM8

MapMan:35.2

Description

No Description!

Coordinates

chrchr7H:-:277160807..277161373

Molecular Weight (calculated)

6950.2 Da

IEP (calculated)

4.696

GRAVY (calculated)

-0.137

Length

65 amino acids

Sequence
(BLAST)

1: MSVSSRFELR APSNLHQQPP PPVGMSGDVG TFADAGNLEH CAKYLNQTLV TFGFPASLDL FATDP

Best Arabidopsis Sequence Match ( AT5G57410.1 )
(BLAST)

001: MPANDAEYDL KVLSQSASAG DYTFANEDNL EHCTKYLNQT MVTFGFPASL DLFSNDPVSI SRTCNCMYSL LQQRQRDIEF RESANELRQR QQSDIARLEA
101: KVERLEALLQ QKDREIATIT RTEAKNTAAL KSQIEKLQQE RDEFQRMVIG NQQVKAQQIH EMKKKEKDYI KLQERLNQVL MEKKKESRSG MEIMNLLQKE
201: GRQRGTWNGK KTDTDFYKKI VDAYEAKNQE LMAENTSLRA LLRSMQTDMR DFLNAPNGSA TLAGSEKREA DPSQSPLGGK TDVFDLPYRM ARGQIEESLR
301: TKMASIKESM VQLQDAPKRA SVTSEATERE LELEAQLVEA RSIIQEQESI MSKHLPKSEQ RRESVASLAA EGV

Arabidopsis Description

Afadin/alpha-actinin-binding protein [Source:UniProtKB/TrEMBL;Acc:F4KAN9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.