Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020441.1-P | Field mustard | cytosol | 46.58 | 71.58 |
| CDY52582 | Canola | nucleus | 11.64 | 23.94 |
| CDX88621 | Canola | cytosol | 55.48 | 21.83 |
| CDY11870 | Canola | cytosol | 55.48 | 21.83 |
| AT5G57410.3 | Thale cress | cytosol | 51.37 | 19.18 |
| HORVU7Hr1G060360.1 | Barley | plastid | 40.41 | 17.51 |
| KRH19028 | Soybean | cytosol | 43.15 | 16.67 |
| KRH02865 | Soybean | cytosol | 42.47 | 16.4 |
| TraesCS7A01G292000.1 | Wheat | cytosol, nucleus, plastid | 41.78 | 15.84 |
| VIT_11s0052g00890.t01 | Wine grape | cytosol | 41.1 | 15.71 |
| TraesCS7D01G288000.2 | Wheat | cytosol, nucleus, plastid | 41.78 | 15.56 |
| TraesCS7B01G183000.7 | Wheat | cytosol, nucleus, plastid | 41.78 | 15.52 |
| Os08t0242900-01 | Rice | nucleus | 41.78 | 15.33 |
| CDY52581 | Canola | nucleus | 38.36 | 15.3 |
| GSMUA_Achr4P20560_001 | Banana | cytosol | 40.41 | 15.29 |
| GSMUA_Achr7P05020_001 | Banana | cytosol | 39.04 | 15.12 |
| Solyc07g019530.2.1 | Tomato | cytosol | 39.73 | 14.95 |
| KXG24799 | Sorghum | mitochondrion, plastid | 39.73 | 14.91 |
| Zm00001d050216_P003 | Maize | plastid | 39.04 | 14.65 |
| CDY30300 | Canola | nucleus | 38.36 | 14.43 |
| KRH13062 | Soybean | cytosol | 2.05 | 2.42 |
| HORVU7Hr1G060410.1 | Barley | cytosol | 0.0 | 0.0 |
| KRH38497 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY61500 | EnsemblPlantsGene:GSBRNA2T00033912001 | ProteinID:CDY61500 | ProteinID:CDY61500.1 | UniParc:UPI0004EDB41C | UniProt:A0A078J591 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC02g44460DBnaC02g44460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J591]
Coordinates
chrLK034004:-:20012..20852
Molecular Weight (calculated)
16618.4 Da
IEP (calculated)
9.053
GRAVY (calculated)
-0.238
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLIDMRDFF LNAPNGSANP SLAGNEKREA DPSQYPLGEK TDVFDLPFRM ARGQIVESLR AKMAFIKVFL LPTFLLQDVP KGISVISEAT ERERESSNVK
101: LSLDVLLQES IMYTRLPKSK QLKLLCLKIG DNYGLNKDDK WSMKML
101: LSLDVLLQES IMYTRLPKSK QLKLLCLKIG DNYGLNKDDK WSMKML
001: MVTFGFPASL DLFSNDPVSI SRTCNCMYSL LQQRQRDIEF RESANELRQR QQSDIARLEA KVERLEALLQ QKDREIATIT RTEAKNTAAL KSQIEKLQQE
101: RDEFQRMVIG NQQVKAQQIH EMKKKEKDYI KLQERLNQVL MEKKKESRSG MEIMNLLQKE GRQRGTWNGK KTDTDFYKKI VDAYEAKNQE LMAENTSLRA
201: LLRSMQTDMR DFLNAPNGSA TLAGSEKREA DPSQSPLGGK TDVFDLPYRM ARGQIEESLR TKMASIKESM VQLQDAPKRA SVTSEATERE LELEAQLVEA
301: RSIIQEQESI MSKHLPKSEQ RRESVASLAA EGV
101: RDEFQRMVIG NQQVKAQQIH EMKKKEKDYI KLQERLNQVL MEKKKESRSG MEIMNLLQKE GRQRGTWNGK KTDTDFYKKI VDAYEAKNQE LMAENTSLRA
201: LLRSMQTDMR DFLNAPNGSA TLAGSEKREA DPSQSPLGGK TDVFDLPYRM ARGQIEESLR TKMASIKESM VQLQDAPKRA SVTSEATERE LELEAQLVEA
301: RSIIQEQESI MSKHLPKSEQ RRESVASLAA EGV
Arabidopsis Description
Afadin/alpha-actinin-binding protein [Source:UniProtKB/TrEMBL;Acc:F4KAN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.