Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G292000.1 | |
| TraesCS7B01G183000.7 | |
| TraesCS7D01G288000.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G38480.1 | TraesCS7A01G292000.1 | AT2G18876.1 | 21798944 |
| AT5G38480.1 | TraesCS7B01G183000.7 | AT2G18876.1 | 21798944 |
| AT5G38480.1 | TraesCS7D01G288000.2 | AT2G18876.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G046400.2 | Wheat | golgi | 100.0 | 100.0 |
| HORVU4Hr1G007370.1 | Barley | plasma membrane | 100.0 | 100.0 |
| TraesCS4A01G268700.1 | Wheat | cytosol | 100.0 | 100.0 |
| Os03t0710800-01 | Rice | nucleus, plasma membrane | 96.55 | 96.92 |
| Bra040592.1-P | Field mustard | cytosol | 86.59 | 86.59 |
| CDY51543 | Canola | cytosol | 86.59 | 86.59 |
| GSMUA_Achr7P10320_001 | Banana | cytosol | 43.68 | 86.36 |
| GSMUA_Achr2P16070_001 | Banana | cytosol | 43.68 | 86.36 |
| CDY28698 | Canola | cytosol | 86.21 | 86.21 |
| Solyc03g034180.2.1 | Tomato | cytosol | 85.06 | 86.05 |
| Bra001049.1-P | Field mustard | cytosol | 85.44 | 85.44 |
| CDX74252 | Canola | cytosol | 85.06 | 85.06 |
| Solyc02g063070.2.1 | Tomato | plastid | 84.67 | 85.0 |
| PGSC0003DMT400062153 | Potato | cytosol | 84.67 | 85.0 |
| KRH01783 | Soybean | nucleus | 83.52 | 84.82 |
| CDX74521 | Canola | cytosol | 83.14 | 84.44 |
| Bra028187.1-P | Field mustard | cytosol | 83.14 | 84.44 |
| AT5G38480.1 | Thale cress | cytosol | 82.38 | 84.31 |
| CDX91996 | Canola | cytosol | 84.29 | 84.29 |
| CDY01659 | Canola | cytosol | 82.76 | 84.05 |
| VIT_14s0006g03230.t01 | Wine grape | cytosol | 83.91 | 83.59 |
| AT3G02520.2 | Thale cress | cytosol | 84.67 | 83.4 |
| CDX67405 | Canola | cytosol | 81.99 | 82.95 |
| PGSC0003DMT400050389 | Potato | cytosol | 82.38 | 82.69 |
| Bra028409.1-P | Field mustard | cytosol | 81.61 | 82.56 |
| TraesCS2B01G344600.1 | Wheat | golgi | 83.14 | 82.51 |
| CDY71290 | Canola | cytosol | 81.23 | 82.49 |
| KRH46909 | Soybean | cytosol | 80.84 | 81.15 |
| TraesCS4B01G159900.1 | Wheat | cytosol | 83.14 | 79.49 |
| AT5G16050.2 | Thale cress | cytosol | 81.23 | 79.1 |
| TraesCS3B01G068000.1 | Wheat | cytosol | 81.23 | 75.18 |
| TraesCS7B01G183800.1 | Wheat | plastid | 73.95 | 73.95 |
| TraesCS4B01G148900.2 | Wheat | cytosol | 50.96 | 53.41 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008426 | GO:GO:0019904 |
| GO:GO:0030234 | InterPro:IPR036815 | PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 |
| ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF40 | SMART:SM00101 | SUPFAM:SSF48445 | EnsemblPlantsGene:TraesCS4B01G045500 |
| EnsemblPlants:TraesCS4B01G045500.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:32806085..32807631
Molecular Weight (calculated)
29266.4 Da
IEP (calculated)
4.531
GRAVY (calculated)
-0.445
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTAEATREE NVYMAKLAEQ AERYEEMVEF MEKVAKTADV GELTVEERNL LSVAYKNVIG ARRASWRIIS SIEQKEESRG NEAYVASIKE YRTRIETELS
101: KICDGILKLL DSHLVPSATA AESKVFYLKM KGDYHRYLAE FKAGAERKEA AENTLVAYKS AQDIALADLP TTHPIRLGLA LNFSVFYYEI LNSPDRACNL
201: AKQAFDEAIA ELDSLGEESY KDSTLIMQLL RDNLTLWTSD NAEEGGDEIK EAASKPEGEG H
101: KICDGILKLL DSHLVPSATA AESKVFYLKM KGDYHRYLAE FKAGAERKEA AENTLVAYKS AQDIALADLP TTHPIRLGLA LNFSVFYYEI LNSPDRACNL
201: AKQAFDEAIA ELDSLGEESY KDSTLIMQLL RDNLTLWTSD NAEEGGDEIK EAASKPEGEG H
001: MSTREENVYM AKLAEQAERY EEMVEFMEKV AKTVDVEELS VEERNLLSVA YKNVIGARRA SWRIISSIEQ KEESKGNEDH VAIIKDYRGK IESELSKICD
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG AERKEAAEST LVAYKSASDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACSLAKQA
201: FDDAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PDGAE
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG AERKEAAEST LVAYKSASDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACSLAKQA
201: FDDAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PDGAE
Arabidopsis Description
GRF3RCI1 [Source:UniProtKB/TrEMBL;Acc:A0A178UA42]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.