Factsheet for TraesCS7B01G183800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G292400.1	Wheat	cytosol	98.85	98.85
TraesCS7A01G295500.1	Wheat	golgi	97.7	98.46
EES14338	Sorghum	cytosol	90.42	91.12
Os08t0480800-01	Rice	plasma membrane	91.95	90.91
Zm00001d052796_P003	Maize	cytosol	90.42	87.73
GSMUA_Achr10P...	Banana	cytosol	41.38	83.72
TraesCS4B01G045500.2	Wheat	cytosol	73.95	73.95
CDX78381	Canola	cytosol	68.97	72.0
CDX81179	Canola	cytosol	68.97	72.0
Zm00001d006462_P001	Maize	cytosol	41.0	71.81
CDY14562	Canola	cytosol	68.2	71.77
CDY40098	Canola	cytosol	68.2	71.77
CDY08794	Canola	cytosol	68.2	71.77
CDX85759	Canola	cytosol	68.2	71.77
Bra024384.1-P	Field mustard	cytosol	68.2	71.77
Bra006061.1-P	Field mustard	cytosol	68.97	71.71
CDY54716	Canola	cytosol	68.2	71.49
CDX81287	Canola	cytosol	68.2	71.49
TraesCS2B01G344600.1	Wheat	golgi	71.65	71.1
Bra037818.1-P	Field mustard	cytosol	67.82	71.08
TraesCS4B01G159900.1	Wheat	cytosol	74.33	71.06
KRH62193	Soybean	endoplasmic reticulum	67.82	70.8
PGSC0003DMT400041634	Potato	cytosol	67.43	70.68
Solyc11g010470.1.1	Tomato	extracellular, nucleus	67.43	70.68
KRH52909	Soybean	endoplasmic reticulum	67.43	70.4
VIT_18s0001g07240.t01	Wine grape	cytosol	67.82	70.24
VIT_00s0199g00190.t01	Wine grape	cytosol	67.43	69.57
CDX97016	Canola	cytosol	60.54	69.3
Solyc04g076060.2.1	Tomato	nucleus	66.67	69.05
PGSC0003DMT400033585	Potato	cytosol	66.67	69.05
AT5G65430.3	Thale cress	cytosol	68.58	68.85
TraesCS3B01G068000.1	Wheat	cytosol	72.8	67.38
AT5G10450.4	Thale cress	cytosol	68.2	65.2
Bra028586.1-P	Field mustard	cytosol	68.2	64.73
TraesCS4B01G148900.2	Wheat	cytosol	49.81	52.21

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	InterPro:IPR036815
PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860
PANTHER:PTHR18860:SF26	SMART:SM00101	SUPFAM:SSF48445	EnsemblPlantsGene:TraesCS7B01G183800	EnsemblPlants:TraesCS7B01G183800.1	SEG:seg

Description

No Description!

Coordinates

chr7B:+:292828541..292840923

Molecular Weight (calculated)

28804.1 Da

IEP (calculated)

4.520

GRAVY (calculated)

-0.300

Length

261 amino acids

Sequence
(BLAST)

001: MAKAAAAGTR EEMVYMAKLA EQAERYEEMV EFMEKVVAAA GTGELTVEER NLLSVAYKNV IGARRASWRI VSSIEQKEEG RGAAGHAAAA RGYRALVEAE
101: LSNICAGILR LLDERLVPAA AAIDAKVFYL KMKGDYHRYL AEFKSAAERK DAADSTLGAY QAAQDIAMKE LPPTHPIRLG LALNFSVFYY EILNSPDRAC
201: SLAKQAFDEA IAELDSLGED SYKDSTLIMQ LLRDNLTLWT SDMQDDAGDE MRDSSKPEDE Q

Best Arabidopsis Sequence Match ( AT1G35160.1 )
(BLAST)

001: MAAPPASSSA REEFVYLAKL AEQAERYEEM VEFMEKVAEA VDKDELTVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE SRGNDDHVTT IRDYRSKIES
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI

Arabidopsis Description

GF14 PHIGF14 protein phi chain [Source:UniProtKB/TrEMBL;Acc:F4HWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.