Factsheet for Bra028586.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40098	Canola	cytosol	88.73	98.39
CDX85759	Canola	cytosol	88.73	98.39
Bra006061.1-P	Field mustard	cytosol	83.64	91.63
Bra024384.1-P	Field mustard	cytosol	79.64	88.31
Bra037818.1-P	Field mustard	cytosol	79.64	87.95
VIT_18s0001g07240.t01	Wine grape	cytosol	77.45	84.52
AT5G10450.4	Thale cress	cytosol	82.18	82.78
Solyc11g010470.1.1	Tomato	extracellular, nucleus	74.91	82.73
PGSC0003DMT400041634	Potato	cytosol	74.91	82.73
VIT_00s0199g00190.t01	Wine grape	cytosol	74.18	80.63
GSMUA_Achr3P06740_001	Banana	cytosol	62.18	77.03
Bra028187.1-P	Field mustard	cytosol	68.36	73.15
Bra028409.1-P	Field mustard	cytosol	68.0	72.48
Bra008355.1-P	Field mustard	cytosol	65.82	72.4
Bra035027.1-P	Field mustard	cytosol	67.27	71.15
Bra040592.1-P	Field mustard	cytosol	67.27	70.88
Bra003649.1-P	Field mustard	cytosol	66.91	70.77
Bra001049.1-P	Field mustard	cytosol	66.91	70.5
Bra028068.1-P	Field mustard	cytosol	66.55	70.11
Bra034430.1-P	Field mustard	cytosol	66.91	69.96
EES14338	Sorghum	cytosol	64.73	68.73
Os08t0480800-01	Rice	plasma membrane	65.82	68.56
Bra016380.1-P	Field mustard	cytosol	64.36	68.34
TraesCS7B01G183800.1	Wheat	plastid	64.73	68.2
TraesCS7A01G295500.1	Wheat	golgi	64.0	67.95
TraesCS7D01G292400.1	Wheat	cytosol	64.36	67.82
Bra012325.1-P	Field mustard	cytosol	63.27	66.16
Zm00001d052796_P003	Maize	cytosol	63.27	64.68
Bra031383.1-P	Field mustard	cytosol	56.36	61.26
Zm00001d006462_P001	Maize	cytosol	32.36	59.73
Bra000268.1-P	Field mustard	cytosol	56.36	59.16
Bra024713.1-P	Field mustard	cytosol	56.36	58.05
Bra016273.1-P	Field mustard	cytosol	56.73	57.78
Bra012455.1-P	Field mustard	cytosol	50.55	45.57
Bra035020.1-P	Field mustard	cytosol	39.64	44.49

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
EnsemblPlantsGene:Bra028586	EnsemblPlants:Bra028586.1	EnsemblPlants:Bra028586.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0019904	InterPro:IPR036815	UniProt:M4EIH1	PFAM:PF00244	PIRSF:PIRSF000868
PRINTS:PR00305	ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF27	SMART:SM00101
SUPFAM:SSF48445	UniParc:UPI00025434E9	SEG:seg	:	:	:

Description

AT5G10450 (E=1e-116) GRF6, AFT1, 14-3-3lambda | GRF6 (G-box regulating factor 6); protein binding / protein phosphorylated amino acid binding

Coordinates

chrA02:+:1171074..1172803

Molecular Weight (calculated)

31283.3 Da

IEP (calculated)

4.590

GRAVY (calculated)

-0.247

Length

275 amino acids

Sequence
(BLAST)

001: MAATLGRDQY VYMAKLAEQA ERYEEMVNFM EKLVTGATPS SELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NEEHVALVKD YRSKVETELS
101: SVCEGILKLL EENLIPSAAA SESKVFYLKM KGDYHRYMAE FKAGEERKAA AEDTMVAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACDM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQILIFLFVV DQSKSIVMEF QFNPFRLHES RQVDQ

Best Arabidopsis Sequence Match ( AT5G10450.3 )
(BLAST)

001: MAATLGRDQY VYMAKLAEQA ERYEEMVQFM EQLVTGATPA EELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NDEHVSLVKD YRSKVESELS
101: SVCSGILKLL DSHLIPSAGA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMLAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACNM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQVFTSLYAV PRYSTPFE

Arabidopsis Description

GRF6G-box regulating factor 6 [Source:TAIR;Acc:AT5G10450]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.