CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052796_P003	Maize	cytosol	94.59	91.08
TraesCS7D01G292400.1	Wheat	cytosol	91.12	90.42
TraesCS7B01G183800.1	Wheat	plastid	91.12	90.42
TraesCS7A01G295500.1	Wheat	golgi	89.96	89.96
Os08t0480800-01	Rice	plasma membrane	91.51	89.77
GSMUA_Achr10P...	Banana	cytosol	43.63	87.6
EES15274	Sorghum	cytosol	74.52	76.28
OQU80487	Sorghum	cytosol	74.52	75.39
Zm00001d006462_P001	Maize	cytosol	42.86	74.5
EES10954	Sorghum	cytosol	74.52	73.95
OQU83613	Sorghum	cytosol	75.29	73.31
CDX81179	Canola	cytosol	70.66	73.2
CDX78381	Canola	cytosol	70.66	73.2
Bra006061.1-P	Field mustard	cytosol	70.66	72.91
CDX85759	Canola	cytosol	69.5	72.58
CDY40098	Canola	cytosol	69.5	72.58
CDX81287	Canola	cytosol	69.5	72.29
Bra037818.1-P	Field mustard	cytosol	69.5	72.29
CDY54716	Canola	cytosol	69.5	72.29
CDY14562	Canola	cytosol	68.73	71.77
CDY08794	Canola	cytosol	68.73	71.77
Bra024384.1-P	Field mustard	cytosol	68.73	71.77
PGSC0003DMT400041634	Potato	cytosol	68.73	71.49
Solyc11g010470.1.1	Tomato	extracellular, nucleus	68.73	71.49
VIT_18s0001g07240.t01	Wine grape	cytosol	68.73	70.63
KRH62193	Soybean	endoplasmic reticulum	67.95	70.4
KRH52909	Soybean	endoplasmic reticulum	67.57	70.0
CDX97016	Canola	cytosol	61.0	69.3
AT5G65430.3	Thale cress	cytosol	68.73	68.46
Solyc04g076060.2.1	Tomato	nucleus	66.41	68.25
PGSC0003DMT400033585	Potato	cytosol	66.41	68.25
VIT_00s0199g00190.t01	Wine grape	cytosol	66.41	67.98
Bra028586.1-P	Field mustard	cytosol	68.73	64.73
AT5G10450.4	Thale cress	cytosol	67.95	64.47
EES10091	Sorghum	cytosol	47.49	49.8

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
EntrezGene:8055380	UniProt:C5YJQ8	ncoils:Coil	EnsemblPlants:EES14338	ProteinID:EES14338	ProteinID:EES14338.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	InterPro:IPR036815	PFAM:PF00244
PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF26
SMART:SM00101	EnsemblPlantsGene:SORBI_3007G226100	SUPFAM:SSF48445	unigene:Sbi.15142	UniParc:UPI0001A87815	RefSeq:XP_002444843.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:65343834..65346208

Molecular Weight (calculated)

28614.8 Da

IEP (calculated)

4.569

GRAVY (calculated)

-0.280

Length

259 amino acids

Sequence
(BLAST)

001: MAAAAAGTRE EMVYMAKLAE QAERYEEMVD FMEKVVAAAA SSELTVEERN LLSVAYKNVI GARRASWRIV SSIEHKEETR GAAGHAAAAR GYRARVEAEL
101: SGICAGILRL LDDRLVPAAA AVDAKVFYLK MKGDYHRYLA EFKTAAERKD AADSTLAAYQ AAQDIAVKEL PPTHPIRLGL ALNFSVFYYE ILNSPDRACS
201: LAKQAFDEAI SELDTLGEES YKDSTLIMQL LRDNLTLWTS DMQEDGSDEM RDASKPDDE

Best Arabidopsis Sequence Match ( AT1G35160.1 )
(BLAST)

001: MAAPPASSSA REEFVYLAKL AEQAERYEEM VEFMEKVAEA VDKDELTVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE SRGNDDHVTT IRDYRSKIES
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI

Arabidopsis Description

GF14 PHIGF14 protein phi chain [Source:UniProtKB/TrEMBL;Acc:F4HWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.