CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024384.1-P	Field mustard	cytosol	100.0	100.0
CDY08794	Canola	cytosol	99.6	99.6
CDY54716	Canola	cytosol	97.58	97.19
CDX81287	Canola	cytosol	97.18	96.79
AT5G65430.3	Thale cress	cytosol	94.76	90.38
CDY40098	Canola	cytosol	89.92	89.92
CDX85759	Canola	cytosol	89.92	89.92
CDX78381	Canola	cytosol	90.32	89.6
CDX81179	Canola	cytosol	89.92	89.2
CDX97016	Canola	cytosol	80.65	87.72
Solyc11g010470.1.1	Tomato	extracellular, nucleus	84.68	84.34
PGSC0003DMT400041634	Potato	cytosol	84.68	84.34
VIT_18s0001g07240.t01	Wine grape	cytosol	84.68	83.33
VIT_00s0199g00190.t01	Wine grape	cytosol	83.87	82.21
GSMUA_Achr3P06740_001	Banana	cytosol	68.55	76.58
CDX67405	Canola	cytosol	75.4	72.48
CDY71290	Canola	cytosol	75.0	72.37
CDX74521	Canola	cytosol	74.6	71.98
CDY01659	Canola	cytosol	74.6	71.98
CDX88436	Canola	cytosol	75.0	71.54
CDX91996	Canola	cytosol	75.0	71.26
CDX79255	Canola	cytosol	74.6	71.15
CDX68022	Canola	cytosol	74.6	71.15
CDY28408	Canola	cytosol	75.0	70.72
CDX73313	Canola	cytosol	75.4	70.57
CDY12024	Canola	cytosol	74.19	70.5
CDY51543	Canola	cytosol	73.79	70.11
CDX74252	Canola	cytosol	73.79	70.11
CDY14618	Canola	cytosol	73.39	70.0
CDY28698	Canola	cytosol	73.39	69.73
EES14338	Sorghum	cytosol	71.77	68.73
CDY41483	Canola	cytosol	71.77	68.73
CDX91676	Canola	cytosol	71.37	68.34
TraesCS7B01G183800.1	Wheat	plastid	71.77	68.2
TraesCS7D01G292400.1	Wheat	cytosol	71.77	68.2
Os08t0480800-01	Rice	plasma membrane	72.18	67.8
CDY00447	Canola	cytosol	70.97	67.69
TraesCS7A01G295500.1	Wheat	golgi	70.56	67.57
CDY46646	Canola	cytosol	70.56	67.31
Zm00001d052796_P003	Maize	cytosol	70.56	65.06
CDY69181	Canola	cytosol	64.52	63.24
CDY38227	Canola	cytosol	64.11	62.85
CDX87455	Canola	cytosol	75.0	62.21
Zm00001d006462_P001	Maize	cytosol	35.48	59.06
CDY61201	Canola	cytosol	64.52	58.82
CDY16161	Canola	cytosol	63.71	58.74
CDX85023	Canola	cytosol	63.71	58.52
CDY42826	Canola	cytosol	63.71	58.3
CDY40251	Canola	cytosol	57.26	57.96
CDY48771	Canola	cytosol	42.34	57.69
CDY20560	Canola	cytosol	57.26	53.18
CDY24128	Canola	cytosol	64.52	48.78
CDY61631	Canola	cytosol	64.52	48.78
CDX97014	Canola	cytosol, plastid	21.37	48.18
CDX91673	Canola	cytosol	50.4	46.47
CDY56386	Canola	mitochondrion	36.29	45.69
CDY52206	Canola	mitochondrion	36.29	45.69
CDX88428	Canola	cytosol	44.35	45.64
CDX87464	Canola	cytosol	38.31	44.81
CDY03135	Canola	cytosol	60.48	38.07

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
GO:A0A078FNX7	UniProt:A0A078FNX7	EnsemblPlants:CDY14562	ProteinID:CDY14562	ProteinID:CDY14562.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	EnsemblPlantsGene:GSBRNA2T00079304001	InterPro:IPR036815
PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860
PANTHER:PTHR18860:SF27	SMART:SM00101	SUPFAM:SSF48445	UniParc:UPI00018C706F	:	:

Description

BnaC03g48970DBnaC03g48970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNX7]

Coordinates

chrLK032044:-:688148..690203

Molecular Weight (calculated)

27963.2 Da

IEP (calculated)

4.537

GRAVY (calculated)

-0.306

Length

248 amino acids

Sequence
(BLAST)

001: MAATLSRDQY VYMAKLAEQA ERYEEMVQFM ESLVSSATPA GELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NEEHVSLVKD YRSKVEGELS
101: TICSGILKLL DTHLIPSATA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMIAYKA AQDVAVADLA PTHPIRLGLA LNFSVFYYEI LNSSEKACSM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA

Best Arabidopsis Sequence Match ( AT5G65430.1 )
(BLAST)

001: MATTLSRDQY VYMAKLAEQA ERYEEMVQFM EQLVSGATPA GELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NEEHVSLVKD YRSKVETELS
101: SICSGILRLL DSHLIPSATA SESKVFYLKM KGDYHRYLAE FKSGDERKTA AEDTMIAYKA AQDVAVADLA PTHPIRLGLA LNFSVFYYEI LNSSEKACSM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA

Arabidopsis Description

GRF8General regulatory factor 8 [Source:UniProtKB/TrEMBL;Acc:F4KHY7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.