Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14562 | Canola | cytosol | 90.38 | 94.76 |
| Bra024384.1-P | Field mustard | cytosol | 90.38 | 94.76 |
| CDY08794 | Canola | cytosol | 90.0 | 94.35 |
| CDX81287 | Canola | cytosol | 88.85 | 92.77 |
| CDY54716 | Canola | cytosol | 88.46 | 92.37 |
| Bra037818.1-P | Field mustard | cytosol | 87.69 | 91.57 |
| AT5G10450.4 | Thale cress | cytosol | 88.85 | 84.62 |
| VIT_18s0001g07240.t01 | Wine grape | cytosol | 81.54 | 84.13 |
| PGSC0003DMT400041634 | Potato | cytosol | 79.23 | 82.73 |
| Solyc11g010470.1.1 | Tomato | extracellular, nucleus | 79.23 | 82.73 |
| VIT_00s0199g00190.t01 | Wine grape | cytosol | 79.62 | 81.82 |
| GSMUA_Achr3P06740_001 | Banana | cytosol | 63.85 | 74.77 |
| AT1G78300.1 | Thale cress | cytosol | 70.77 | 71.04 |
| AT5G38480.1 | Thale cress | cytosol | 69.62 | 70.98 |
| AT3G02520.2 | Thale cress | cytosol | 71.54 | 70.19 |
| AT5G16050.2 | Thale cress | cytosol | 71.54 | 69.4 |
| EES14338 | Sorghum | cytosol | 68.46 | 68.73 |
| TraesCS7B01G183800.1 | Wheat | plastid | 68.85 | 68.58 |
| TraesCS7D01G292400.1 | Wheat | cytosol | 68.85 | 68.58 |
| TraesCS7A01G295500.1 | Wheat | golgi | 67.69 | 67.95 |
| Os08t0480800-01 | Rice | plasma membrane | 68.85 | 67.8 |
| Zm00001d052796_P003 | Maize | cytosol | 67.31 | 65.06 |
| AT1G34760.1 | Thale cress | cytosol | 61.54 | 62.75 |
| AT1G22300.1 | Thale cress | cytosol | 60.77 | 62.2 |
| AT1G35160.2 | Thale cress | cytosol | 70.38 | 62.03 |
| AT1G26480.1 | Thale cress | cytosol | 62.31 | 60.45 |
| AT4G09000.2 | Thale cress | cytosol | 73.08 | 59.75 |
| Zm00001d006462_P001 | Maize | cytosol | 34.23 | 59.73 |
| AT2G42590.3 | Thale cress | cytosol | 61.92 | 58.33 |
| AT1G78220.1 | Thale cress | cytosol | 41.54 | 44.08 |
| AT1G22290.2 | Thale cress | cytosol | 34.23 | 41.2 |
| AT2G10450.1 | Thale cress | extracellular | 10.77 | 34.15 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| EntrezGene:830909 | EntrezGene:836668 | ProteinID:AED98054.1 | ArrayExpress:AT5G65430 | EnsemblPlantsGene:AT5G65430 | RefSeq:AT5G65430 |
| TAIR:AT5G65430 | RefSeq:AT5G65430-TAIR-G | EnsemblPlants:AT5G65430.3 | TAIR:AT5G65430.3 | Unigene:At.24133 | ncoils:Coil |
| UniProt:F4KHY7 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005618 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009409 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 |
| GO:GO:0009719 | GO:GO:0009742 | GO:GO:0009987 | GO:GO:0019904 | GO:GO:0030312 | Symbol:GRF8 |
| InterPro:IPR036815 | RefSeq:NP_001190621.1 | PFAM:PF00244 | PIRSF:PIRSF000868 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF27 | SMART:SM00101 |
| SUPFAM:SSF48445 | UniParc:UPI0001E9313A | : | : | : | : |
Description
GRF8General regulatory factor 8 [Source:UniProtKB/TrEMBL;Acc:F4KHY7]
Coordinates
chr5:-:26148382..26150476
Molecular Weight (calculated)
29532.3 Da
IEP (calculated)
5.078
GRAVY (calculated)
-0.240
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTLSRDQY VYMAKLAEQA ERYEEMVQFM EQLVSGATPA GELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NEEHVSLVKD YRSKVETELS
101: SICSGILRLL DSHLIPSATA SESKVFYLKM KGDYHRYLAE FKSGDERKTA AEDTMIAYKA AQDVAVADLA PTHPIRLGLA LNFSVFYYEI LNSSEKACSM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQVCPILYFH IQLHHQKLAY
101: SICSGILRLL DSHLIPSATA SESKVFYLKM KGDYHRYLAE FKSGDERKTA AEDTMIAYKA AQDVAVADLA PTHPIRLGLA LNFSVFYYEI LNSSEKACSM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQVCPILYFH IQLHHQKLAY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.