Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88428 | Canola | cytosol | 67.76 | 68.88 |
| Bra035020.1-P | Field mustard | cytosol | 68.16 | 68.16 |
| CDX87464 | Canola | cytosol | 56.33 | 65.09 |
| AT1G22300.1 | Thale cress | cytosol | 56.33 | 54.33 |
| AT1G34760.1 | Thale cress | cytosol | 51.43 | 49.41 |
| AT5G38480.1 | Thale cress | cytosol | 48.16 | 46.27 |
| AT2G42590.3 | Thale cress | cytosol | 51.84 | 46.01 |
| AT1G26480.1 | Thale cress | cytosol | 50.2 | 45.9 |
| AT3G02520.2 | Thale cress | cytosol | 48.16 | 44.53 |
| AT1G78300.1 | Thale cress | cytosol | 46.12 | 43.63 |
| AT5G16050.2 | Thale cress | cytosol | 47.35 | 43.28 |
| AT1G22290.2 | Thale cress | cytosol | 37.14 | 42.13 |
| AT5G65430.3 | Thale cress | cytosol | 44.08 | 41.54 |
| AT5G10450.4 | Thale cress | cytosol | 44.9 | 40.29 |
| AT1G35160.2 | Thale cress | cytosol | 46.53 | 38.64 |
| AT4G09000.2 | Thale cress | cytosol | 46.12 | 35.53 |
| AT2G10450.1 | Thale cress | extracellular | 6.53 | 19.51 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 | EntrezGene:844158 |
| ProteinID:AEE36083.1 | ArrayExpress:AT1G78220 | EnsemblPlantsGene:AT1G78220 | RefSeq:AT1G78220 | TAIR:AT1G78220 | RefSeq:AT1G78220-TAIR-G |
| EnsemblPlants:AT1G78220.1 | TAIR:AT1G78220.1 | Unigene:At.34322 | ncoils:Coil | UniProt:F4IA59 | Symbol:GF14 PI |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | InterPro:IPR036815 | RefSeq:NP_565174.1 |
| PFAM:PF00244 | PIRSF:PIRSF000868 | PO:PO:0007611 | PO:PO:0009001 | PO:PO:0009025 | PO:PO:0009031 |
| PRINTS:PR00305 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF32 | SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI00001632F3 |
Description
GF14 PIGeneral regulatory factor 13 [Source:UniProtKB/TrEMBL;Acc:F4IA59]
Coordinates
chr1:-:29425721..29427181
Molecular Weight (calculated)
27926.3 Da
IEP (calculated)
4.550
GRAVY (calculated)
-0.442
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MENEREKLIY LAKLGCQAGR YDDVMKSMRK VCELDIELSE EERDLLTTGY KNVMEAKRVS LRVISSIEKM EDSKGNDQNV KLIKGQQEMV KYEFFNVCND
101: ILSLIDSHLI PSTTTNVESI VLFNRVKGDY FRYMAEFGSD AERKENADNS LDAYKVAMEM AENSLAPTNM VRLGLALNFS IFNYEIHKSI ESACKLVKKA
201: YDEAITELDG LDKNICEESM YIIEMLKYNL STWTSGDGNG NKTDG
101: ILSLIDSHLI PSTTTNVESI VLFNRVKGDY FRYMAEFGSD AERKENADNS LDAYKVAMEM AENSLAPTNM VRLGLALNFS IFNYEIHKSI ESACKLVKKA
201: YDEAITELDG LDKNICEESM YIIEMLKYNL STWTSGDGNG NKTDG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.