Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G78300.1 | Thale cress | cytosol | 74.53 | 91.51 |
| AT1G35160.2 | Thale cress | cytosol | 79.56 | 85.76 |
| PGSC0003DMT400060654 | Potato | cytosol | 67.3 | 83.92 |
| PGSC0003DMT400041810 | Potato | cytosol | 67.92 | 83.72 |
| Solyc04g012120.2.1 | Tomato | extracellular, nucleus | 66.98 | 83.53 |
| AT5G38480.1 | Thale cress | cytosol | 64.78 | 80.78 |
| AT3G02520.2 | Thale cress | cytosol | 67.3 | 80.75 |
| AT5G16050.2 | Thale cress | cytosol | 65.72 | 77.99 |
| Solyc11g010200.1.1 | Tomato | nucleus | 65.41 | 77.32 |
| AT5G65430.3 | Thale cress | cytosol | 59.75 | 73.08 |
| AT5G10450.4 | Thale cress | cytosol | 60.06 | 69.96 |
| AT1G34760.1 | Thale cress | cytosol | 53.46 | 66.67 |
| AT1G26480.1 | Thale cress | cytosol | 55.03 | 65.3 |
| AT1G22300.1 | Thale cress | cytosol | 51.26 | 64.17 |
| AT2G42590.3 | Thale cress | cytosol | 54.09 | 62.32 |
| KRH05108 | Soybean | cytosol | 30.19 | 60.38 |
| Zm00001d013429_P001 | Maize | extracellular | 21.38 | 58.62 |
| GSMUA_Achr3P17880_001 | Banana | cytosol | 26.42 | 47.73 |
| AT1G78220.1 | Thale cress | cytosol | 35.53 | 46.12 |
| AT1G22290.2 | Thale cress | cytosol | 29.25 | 43.06 |
| AT2G10450.1 | Thale cress | extracellular | 9.43 | 36.59 |
| VIT_00s0199g00140.t01 | Wine grape | cytosol | 44.65 | 24.44 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| EntrezGene:826479 | ProteinID:AEE82710.1 | ArrayExpress:AT4G09000 | EnsemblPlantsGene:AT4G09000 | RefSeq:AT4G09000 | TAIR:AT4G09000 |
| RefSeq:AT4G09000-TAIR-G | EnsemblPlants:AT4G09000.2 | TAIR:AT4G09000.2 | Unigene:At.47549 | ncoils:Coil | UniProt:F4JJ94 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005794 | GO:GO:0005829 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019904 | GO:GO:0045309 | GO:GO:0046686 | GO:GO:0048046 |
| Symbol:GRF1 | InterPro:IPR036815 | RefSeq:NP_001154216.1 | PFAM:PF00244 | PO:PO:0000005 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0005679 | PO:PO:0006339 | PO:PO:0007131 | PO:PO:0009025 |
| PO:PO:0020030 | PO:PO:0025166 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00305 | ScanProsite:PS00796 |
| ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF26 | SMART:SM00101 | SUPFAM:SSF48445 | TMHMM:TMhelix |
| UniParc:UPI0001A7B3F2 | SEG:seg | : | : | : | : |
Description
GRF1General regulatory factor 1 [Source:UniProtKB/TrEMBL;Acc:F4JJ94]
Coordinates
chr4:+:5775210..5777481
Molecular Weight (calculated)
35840.4 Da
IEP (calculated)
4.371
GRAVY (calculated)
-0.183
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPGASSAR DEFVYMAKLA EQAERYEEMV EFMEKVAKAV DKDELTVEER NLLSVAYKNV IGARRASWRI ISSIEQKEES RGNDDHVSLI RDYRSKIETE
101: LSDICDGILK LLDTILVPAA ASGDSKVFYL KMKGDYHRYL AEFKSGQERK DAAEHTLTAY KAAQDIANSE LAPTHPIRLG LALNFSVFYY EILNSPDRAC
201: NLAKQAFDEA IAELDTLGEE SYKDSTLIMQ LLRDNLTLWT SDMQIWISSL FDAFFWSNSD FGDCQLFYIL IHSSILLSCG LILIMMILSN VFFNQDDVAD
301: DIKEAAPAAA KPADEQQS
101: LSDICDGILK LLDTILVPAA ASGDSKVFYL KMKGDYHRYL AEFKSGQERK DAAEHTLTAY KAAQDIANSE LAPTHPIRLG LALNFSVFYY EILNSPDRAC
201: NLAKQAFDEA IAELDTLGEE SYKDSTLIMQ LLRDNLTLWT SDMQIWISSL FDAFFWSNSD FGDCQLFYIL IHSSILLSCG LILIMMILSN VFFNQDDVAD
301: DIKEAAPAAA KPADEQQS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.