Factsheet for AT1G26480.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024713.1-P	Field mustard	cytosol	94.78	95.13
CDY16161	Canola	cytosol	94.03	93.68
Bra016273.1-P	Field mustard	cytosol	94.03	93.33
CDX85023	Canola	cytosol	93.66	92.96
CDY40251	Canola	cytosol	82.84	90.61
KRG89486	Soybean	cytosol	81.34	83.85
KRH70879	Soybean	endoplasmic reticulum	80.97	83.78
KRH50527	Soybean	cytosol	80.97	83.78
KRH75027	Soybean	endoplasmic reticulum	80.6	83.4
VIT_01s0011g00620.t01	Wine grape	cytosol	82.09	83.02
CDY20560	Canola	cytosol	82.46	82.77
Solyc05g012420.2.1	Tomato	unclear	82.46	77.54
Solyc01g010360.2.1	Tomato	cytosol	79.1	77.37
PGSC0003DMT400072941	Potato	cytosol	81.72	76.84
CDY24128	Canola	cytosol	94.03	76.83
CDY61631	Canola	cytosol	94.03	76.83
AT1G34760.1	Thale cress	cytosol	72.01	75.69
AT1G22300.1	Thale cress	cytosol	69.03	72.83
Bra012455.1-P	Field mustard	cytosol	82.84	72.79
AT2G42590.3	Thale cress	cytosol	73.51	71.38
AT5G38480.1	Thale cress	cytosol	66.04	69.41
AT1G78300.1	Thale cress	cytosol	65.67	67.95
AT3G02520.2	Thale cress	cytosol	64.55	65.28
AT5G16050.2	Thale cress	cytosol	63.81	63.81
AT5G65430.3	Thale cress	cytosol	60.45	62.31
AT1G35160.2	Thale cress	cytosol	64.18	58.31
AT5G10450.4	Thale cress	cytosol	58.58	57.51
AT4G09000.2	Thale cress	cytosol	65.3	55.03
AT1G78220.1	Thale cress	cytosol	45.9	50.2
AT1G22290.2	Thale cress	cytosol	39.55	49.07
AT2G10450.1	Thale cress	extracellular	10.82	35.37

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
EntrezGene:839189	UniProt:A0A178WJF9	ProteinID:AAF98570.1	ProteinID:AEE30696.1	EMBL:AF335544	EMBL:AK117907
ArrayExpress:AT1G26480	EnsemblPlantsGene:AT1G26480	RefSeq:AT1G26480	TAIR:AT1G26480	RefSeq:AT1G26480-TAIR-G	EnsemblPlants:AT1G26480.1
TAIR:AT1G26480.1	EMBL:AY085338	EMBL:BT006230	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0019904	Symbol:GRF12	InterPro:IPR036815	RefSeq:NP_564249.1	ProteinID:OAP17242.1	PFAM:PF00244
PIRSF:PIRSF000868	PO:PO:0001016	PO:PO:0001017	PO:PO:0007611	PO:PO:0007616	PO:PO:0009030
PO:PO:0009032	PO:PO:0009046	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00305
ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF59	UniProt:Q9C5W6	SMART:SM00101
SUPFAM:SSF48445	UniParc:UPI00000041F3	:	:	:	:

Description

GRF12GRF12 [Source:UniProtKB/TrEMBL;Acc:A0A178WJF9]

Coordinates

chr1:-:9156279..9158093

Molecular Weight (calculated)

30546.7 Da

IEP (calculated)

4.540

GRAVY (calculated)

-0.724

Length

268 amino acids

Sequence
(BLAST)

001: MSSSGSDKER ETFVYMAKLS EQAERYDEMV ETMKKVARVN SELTVEERNL LSVGYKNVIG ARRASWRIMS SIEQKEESKG NESNVKQIKG YRQKVEDELA
101: NICQDILTII DQHLIPHATS GEATVFYYKM KGDYYRYLAE FKTEQERKEA AEQSLKGYEA ATQAASTELP STHPIRLGLA LNFSVFYYEI MNSPERACHL
201: AKQAFDEAIA ELDTLSEESY KDSTLIMQLL RDNLTLWTSD LPEDGGEDNI KTEESKQEQA KPADATEN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.