Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006061.1-P | Field mustard | cytosol | 84.98 | 92.43 |
| CDX78381 | Canola | cytosol | 84.62 | 92.4 |
| CDY40098 | Canola | cytosol | 83.15 | 91.53 |
| CDX85759 | Canola | cytosol | 83.15 | 91.53 |
| CDX81179 | Canola | cytosol | 83.52 | 91.2 |
| CDX97016 | Canola | cytosol | 74.73 | 89.47 |
| AT5G65430.3 | Thale cress | cytosol | 84.62 | 88.85 |
| VIT_18s0001g07240.t01 | Wine grape | cytosol | 77.29 | 83.73 |
| Solyc11g010470.1.1 | Tomato | extracellular, nucleus | 76.19 | 83.53 |
| PGSC0003DMT400041634 | Potato | cytosol | 76.19 | 83.53 |
| VIT_00s0199g00190.t01 | Wine grape | cytosol | 76.19 | 82.21 |
| Bra028586.1-P | Field mustard | cytosol | 82.78 | 82.18 |
| GSMUA_Achr3P06740_001 | Banana | cytosol | 59.71 | 73.42 |
| AT1G78300.1 | Thale cress | cytosol | 68.5 | 72.2 |
| AT5G38480.1 | Thale cress | cytosol | 66.3 | 70.98 |
| AT3G02520.2 | Thale cress | cytosol | 67.77 | 69.81 |
| AT5G16050.2 | Thale cress | cytosol | 67.77 | 69.03 |
| TraesCS7B01G183800.1 | Wheat | plastid | 65.2 | 68.2 |
| TraesCS7D01G292400.1 | Wheat | cytosol | 65.2 | 68.2 |
| Os08t0480800-01 | Rice | plasma membrane | 65.93 | 68.18 |
| TraesCS7A01G295500.1 | Wheat | golgi | 64.47 | 67.95 |
| EES14338 | Sorghum | cytosol | 64.47 | 67.95 |
| Zm00001d052796_P003 | Maize | cytosol | 63.37 | 64.31 |
| AT1G35160.2 | Thale cress | cytosol | 68.86 | 63.73 |
| AT1G22300.1 | Thale cress | cytosol | 57.51 | 61.81 |
| AT4G09000.2 | Thale cress | cytosol | 69.96 | 60.06 |
| AT1G34760.1 | Thale cress | cytosol | 56.04 | 60.0 |
| Zm00001d006462_P001 | Maize | cytosol | 32.6 | 59.73 |
| AT1G26480.1 | Thale cress | cytosol | 57.51 | 58.58 |
| AT2G42590.3 | Thale cress | cytosol | 58.24 | 57.61 |
| AT1G78220.1 | Thale cress | cytosol | 40.29 | 44.9 |
| AT1G22290.2 | Thale cress | cytosol | 31.14 | 39.35 |
| AT2G10450.1 | Thale cress | extracellular | 10.26 | 34.15 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| EntrezGene:830909 | ProteinID:AED91544.1 | ArrayExpress:AT5G10450 | EnsemblPlantsGene:AT5G10450 | RefSeq:AT5G10450 | TAIR:AT5G10450 |
| RefSeq:AT5G10450-TAIR-G | EnsemblPlants:AT5G10450.4 | TAIR:AT5G10450.4 | Unigene:At.24269 | ProteinID:CAB89398.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | Symbol:GRF6 | InterPro:IPR036815 |
| RefSeq:NP_001190276.1 | PFAM:PF00244 | PIRSF:PIRSF000868 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000282 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF27 |
| SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI000016DB0E | SEG:seg | : | : |
Description
GRF6G-box regulating factor 6 [Source:TAIR;Acc:AT5G10450]
Coordinates
chr5:-:3283853..3286347
Molecular Weight (calculated)
30992.9 Da
IEP (calculated)
4.994
GRAVY (calculated)
-0.356
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATLGRDQY VYMAKLAEQA ERYEEMVQFM EQLVTGATPA EELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NDEHVSLVKD YRSKVESELS
101: SVCSGILKLL DSHLIPSAGA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMLAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACNM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQTNQMHHIR DIKEHVKTEI TAKPCVLSYY YSM
101: SVCSGILKLL DSHLIPSAGA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMLAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACNM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQTNQMHHIR DIKEHVKTEI TAKPCVLSYY YSM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.