Factsheet for VIT_00s0199g00190.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g07240.t01	Wine grape	cytosol	84.58	84.92
Solyc11g010470.1.1	Tomato	extracellular, nucleus	83.4	84.74
PGSC0003DMT400041634	Potato	cytosol	83.4	84.74
Bra024384.1-P	Field mustard	cytosol	82.21	83.87
CDY14562	Canola	cytosol	82.21	83.87
CDY54716	Canola	cytosol	82.21	83.53
CDY08794	Canola	cytosol	81.82	83.47
Bra037818.1-P	Field mustard	cytosol	81.82	83.13
CDX81287	Canola	cytosol	81.82	83.13
CDX85759	Canola	cytosol	81.42	83.06
CDY40098	Canola	cytosol	81.42	83.06
CDX78381	Canola	cytosol	80.24	81.2
Bra006061.1-P	Field mustard	cytosol	80.24	80.88
CDX81179	Canola	cytosol	79.84	80.8
AT5G65430.3	Thale cress	cytosol	81.82	79.62
CDX97016	Canola	cytosol	70.75	78.51
GSMUA_Achr3P06740_001	Banana	cytosol	67.59	77.03
AT5G10450.4	Thale cress	cytosol	82.21	76.19
Bra028586.1-P	Field mustard	cytosol	80.63	74.18
VIT_18s0001g06330.t01	Wine grape	extracellular	73.91	71.92
VIT_07s0191g00090.t01	Wine grape	cytosol	72.33	71.76
VIT_14s0006g03230.t01	Wine grape	cytosol	73.12	70.61
TraesCS7B01G183800.1	Wheat	plastid	69.57	67.43
TraesCS7D01G292400.1	Wheat	cytosol	69.57	67.43
TraesCS7A01G295500.1	Wheat	golgi	68.38	66.8
Os08t0480800-01	Rice	plasma membrane	69.57	66.67
EES14338	Sorghum	cytosol	67.98	66.41
VIT_18s0001g05720.t01	Wine grape	cytosol	64.82	65.08
Zm00001d052796_P003	Maize	cytosol	66.8	62.83
VIT_19s0014g01420.t01	Wine grape	cytosol	64.03	61.36
VIT_01s0011g00620.t01	Wine grape	cytosol	64.03	61.13
Zm00001d006462_P001	Maize	cytosol	34.39	58.39
VIT_10s0003g01240.t01	Wine grape	cytosol	65.22	57.69
VIT_00s0199g00140.t01	Wine grape	cytosol	71.15	30.98

Protein Annotations

Gene3D:1.20.190.20	EntrezGene:100250873	wikigene:100250873	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf
InterPro:14-3-3_domain	MapMan:35.1	ProteinID:CCB45248	ProteinID:CCB45248.1	ncoils:Coil	UniProt:F6GZ62
EMBL:FN594987	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	InterPro:IPR036815
EntrezGene:LOC100250873	wikigene:LOC100250873	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796
ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF27	SMART:SM00101	SUPFAM:SSF48445	TIGR:TC70743
UniParc:UPI00015CD8A2	ArrayExpress:VIT_00s0199g00190	EnsemblPlantsGene:VIT_00s0199g00190	EnsemblPlants:VIT_00s0199g00190.t01	unigene:Vvi.15439	RefSeq:XP_002274546
RefSeq:XP_002274546.1	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:11210066..11213944

Molecular Weight (calculated)

28807.2 Da

IEP (calculated)

4.511

GRAVY (calculated)

-0.316

Length

253 amino acids

Sequence
(BLAST)

001: MAPPSVPETL TREQYVYMAK LAEQAERYEE MAKFMEKLVF DSTPVGELTV EERNLLSVAY KNVIGALRAA WRIVSSIEQK EEGRQNDDHV SLVKDYRSTV
101: ESELSEVCAN ILKLIESHLI PSASSSESKV FFLKMKGDYH RYLAEFKFGN ERKEAAEFTM LAYKAAQDIA HADLSPTHPI RLGLALNFSV FYYEILNSSE
201: KACSMAKQAF EEAIAELDTL GEDSYKDSTL IMQLLRDNLT LWSSDMQEQL DEI

Best Arabidopsis Sequence Match ( AT5G65430.1 )
(BLAST)

001: MATTLSRDQY VYMAKLAEQA ERYEEMVQFM EQLVSGATPA GELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NEEHVSLVKD YRSKVETELS
101: SICSGILRLL DSHLIPSATA SESKVFYLKM KGDYHRYLAE FKSGDERKTA AEDTMIAYKA AQDVAVADLA PTHPIRLGLA LNFSVFYYEI LNSSEKACSM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA

Arabidopsis Description

GRF8General regulatory factor 8 [Source:UniProtKB/TrEMBL;Acc:F4KHY7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.