Factsheet for VIT_19s0014g01420.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27042	Soybean	nucleus	81.82	82.76
VIT_18s0001g05720.t01	Wine grape	cytosol	78.03	81.75
KRH22287	Soybean	nucleus, plasma membrane	80.68	81.61
VIT_10s0003g01240.t01	Wine grape	cytosol	85.61	79.02
VIT_01s0011g00620.t01	Wine grape	cytosol	76.14	75.85
Bra000268.1-P	Field mustard	cytosol	73.48	74.05
AT2G42590.3	Thale cress	cytosol	76.89	73.55
CDY61201	Canola	cytosol	73.86	71.69
CDY42826	Canola	cytosol	73.11	71.22
VIT_07s0191g00090.t01	Wine grape	cytosol	67.05	69.41
VIT_18s0001g06330.t01	Wine grape	extracellular	66.67	67.69
VIT_14s0006g03230.t01	Wine grape	cytosol	66.29	66.79
VIT_00s0199g00190.t01	Wine grape	cytosol	61.36	64.03
VIT_18s0001g07240.t01	Wine grape	cytosol	60.23	63.1
VIT_00s0199g00140.t01	Wine grape	cytosol	45.45	20.65

Protein Annotations

Gene3D:1.20.190.20	EntrezGene:100250345	wikigene:100250345	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf
InterPro:14-3-3_domain	MapMan:35.1	ProteinID:CCB46258	ProteinID:CCB46258.1	ncoils:Coil	UniProt:F6H2P0
EMBL:FN595229	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	InterPro:IPR036815
EntrezGene:LOC100250345	wikigene:LOC100250345	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796
ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF31	SMART:SM00101	SUPFAM:SSF48445	TIGR:TC60069
UniParc:UPI0002109225	ArrayExpress:VIT_19s0014g01420	EnsemblPlantsGene:VIT_19s0014g01420	EnsemblPlants:VIT_19s0014g01420.t01	unigene:Vvi.23536	unigene:Vvi.24283
RefSeq:XP_002285427	RefSeq:XP_002285427.1	:	:	:	:

Description

No Description!

Coordinates

chr19:+:1489168..1494033

Molecular Weight (calculated)

29930.0 Da

IEP (calculated)

4.470

GRAVY (calculated)

-0.585

Length

264 amino acids

Sequence
(BLAST)

001: MARENFVYIA KLAEQAERYD EMVDAMKKVA KLDVDLTVEE RNLLSVGYKN VIGARRASWR ILSSIEQKEE VRGNEQNAKR IKEYRQKVES ELSGICSDIM
101: TVIDEHLIPA STAGESTVFY YKMKGDYYRY LAEFKTGNER KEAADQSLKA YQTASTTAES DLSPTHPIRL GLALNFSVFY YEIMNSPERA CHLAKQAFDE
201: AISELDTLSE ESYKDSTLIM QLLRDNLTLW TSDIPEDGED QKMESSAKAG GDDEDDSSRL SGVF

Best Arabidopsis Sequence Match ( AT2G42590.2 )
(BLAST)

001: MGSGKERDTF VYLAKLSEQA ERYEEMVESM KSVAKLNVDL TVEERNLLSV GYKNVIGSRR ASWRIFSSIE QKEAVKGNDV NVKRIKEYME KVELELSNIC
101: IDIMSVLDEH LIPSASEGES TVFFNKMKGD YYRYLAEFKS GNERKEAADQ SLKAYEIATT AAEAKLPPTH PIRLGLALNF SVFYYEIMNA PERACHLAKQ
201: AFDEAISELD TLNEESYKDS TLIMQLLRDN LTLWTSDISE EGDDAHKTNG SAKPGAGGDD AE

Arabidopsis Description

GRF9General regulatory factor 9 [Source:UniProtKB/TrEMBL;Acc:F4IP55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.