Factsheet for Bra000268.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61201	Canola	cytosol	99.62	95.96
CDY42826	Canola	cytosol	98.86	95.57
AT2G42590.3	Thale cress	cytosol	93.51	88.77
KRH22287	Soybean	nucleus, plasma membrane	79.39	79.69
KRH27042	Soybean	nucleus	79.01	79.31
VIT_19s0014g01420.t01	Wine grape	cytosol	74.05	73.48
Bra031383.1-P	Field mustard	cytosol	69.47	71.94
Bra024713.1-P	Field mustard	cytosol	72.14	70.79
VIT_10s0003g01240.t01	Wine grape	cytosol	75.95	69.58
Bra016273.1-P	Field mustard	cytosol	71.37	69.26
Bra040592.1-P	Field mustard	cytosol	65.27	65.52
Bra028409.1-P	Field mustard	cytosol	64.5	65.5
Bra028187.1-P	Field mustard	cytosol	64.12	65.37
Bra001049.1-P	Field mustard	cytosol	64.89	65.13
Bra024384.1-P	Field mustard	cytosol	60.69	64.11
Bra037818.1-P	Field mustard	cytosol	60.69	63.86
Bra008355.1-P	Field mustard	cytosol	60.31	63.2
Bra016380.1-P	Field mustard	cytosol	61.83	62.55
Bra034430.1-P	Field mustard	cytosol	62.6	62.36
Bra035027.1-P	Field mustard	cytosol	61.45	61.92
Bra003649.1-P	Field mustard	cytosol	61.45	61.92
Bra006061.1-P	Field mustard	cytosol	59.16	61.75
Bra028068.1-P	Field mustard	cytosol	61.45	61.69
Bra012325.1-P	Field mustard	cytosol	60.69	60.46
Bra028586.1-P	Field mustard	cytosol	59.16	56.36
Bra012455.1-P	Field mustard	cytosol	63.36	54.43
Bra035020.1-P	Field mustard	cytosol	47.33	50.61

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
EnsemblPlantsGene:Bra000268	EnsemblPlants:Bra000268.1	EnsemblPlants:Bra000268.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791
GO:GO:0016020	GO:GO:0019904	GO:GO:0048528	InterPro:IPR036815	UniProt:M4C7U0	PFAM:PF00244
PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF31
SMART:SM00101	SUPFAM:SSF48445	UniParc:UPI00025403C4	:	:	:

Description

AT2G42590 (E=3e-138) GRF9, GF14 MU | GRF9 (GENERAL REGULATORY FACTOR 9); calcium ion binding / protein binding / protein phosphorylated amino acid binding

Coordinates

chrA03:-:10253603..10255197

Molecular Weight (calculated)

29558.7 Da

IEP (calculated)

4.524

GRAVY (calculated)

-0.503

Length

262 amino acids

Sequence
(BLAST)

001: MESAKERDTF VYLAKISEQA ERYEEMVESM KNLAKLNVDL TVEERNLLSV GYKNVIGSRR ASWRIFSSIE QKEAVKGNDV NVKRIKDYME KVELELTSIC
101: IDIMSVLDEH LIPSASEGES TVFFNKMKGD YYRYLAEFKS GDERKEAADQ SLKAYEIATT SAAAKLPPTH PIRLGLALNF SVFYYEIMNS PERACHLAKE
201: AFDEAISELD SLNEESYKDS TLILQLLRDN LTLWTSDIPE EGDDAHKTNG SAKHGAGGDD AE

Best Arabidopsis Sequence Match ( AT2G42590.2 )
(BLAST)

001: MGSGKERDTF VYLAKLSEQA ERYEEMVESM KSVAKLNVDL TVEERNLLSV GYKNVIGSRR ASWRIFSSIE QKEAVKGNDV NVKRIKEYME KVELELSNIC
101: IDIMSVLDEH LIPSASEGES TVFFNKMKGD YYRYLAEFKS GNERKEAADQ SLKAYEIATT AAEAKLPPTH PIRLGLALNF SVFYYEIMNA PERACHLAKQ
201: AFDEAISELD TLNEESYKDS TLIMQLLRDN LTLWTSDISE EGDDAHKTNG SAKPGAGGDD AE

Arabidopsis Description

GRF9General regulatory factor 9 [Source:UniProtKB/TrEMBL;Acc:F4IP55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.