Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0014g01420.t01 | Wine grape | cytosol | 79.02 | 85.61 |
| KRH27042 | Soybean | nucleus | 76.57 | 83.91 |
| KRH22287 | Soybean | nucleus, plasma membrane | 75.87 | 83.14 |
| VIT_18s0001g05720.t01 | Wine grape | cytosol | 69.93 | 79.37 |
| Bra000268.1-P | Field mustard | cytosol | 69.58 | 75.95 |
| AT2G42590.3 | Thale cress | cytosol | 72.73 | 75.36 |
| VIT_01s0011g00620.t01 | Wine grape | cytosol | 68.88 | 74.34 |
| CDY61201 | Canola | cytosol | 70.28 | 73.9 |
| CDY42826 | Canola | cytosol | 69.58 | 73.43 |
| VIT_14s0006g03230.t01 | Wine grape | cytosol | 61.19 | 66.79 |
| VIT_07s0191g00090.t01 | Wine grape | cytosol | 59.44 | 66.67 |
| VIT_18s0001g06330.t01 | Wine grape | extracellular | 60.49 | 66.54 |
| VIT_00s0199g00190.t01 | Wine grape | cytosol | 57.69 | 65.22 |
| VIT_18s0001g07240.t01 | Wine grape | cytosol | 56.99 | 64.68 |
| VIT_00s0199g00140.t01 | Wine grape | cytosol | 43.01 | 21.17 |
Protein Annotations
| Gene3D:1.20.190.20 | EntrezGene:100244643 | wikigene:100244643 | InterPro:14-3-3 | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain |
| MapMan:35.1 | ProteinID:CBI30682 | ProteinID:CBI30682.3 | ncoils:Coil | UniProt:D7TJL0 | EMBL:FN595992 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | InterPro:IPR036815 | EntrezGene:LOC100244643 |
| wikigene:LOC100244643 | PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF31 |
| SMART:SM00101 | SUPFAM:SSF48445 | TIGR:TC52645 | UniParc:UPI0001BE37E3 | ArrayExpress:VIT_10s0003g01240 | EnsemblPlantsGene:VIT_10s0003g01240 |
| EnsemblPlants:VIT_10s0003g01240.t01 | RefSeq:XP_002273375 | RefSeq:XP_002273375.2 | : | : | : |
Description
No Description!
Coordinates
chr10:+:2568369..2571848
Molecular Weight (calculated)
32384.0 Da
IEP (calculated)
4.524
GRAVY (calculated)
-0.444
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSKDRDTF VYVAKLAEQA ERYDEMVDSM KKVAKLDVEL TVEERNLLSV GFKNVIGARR ASWRILSSIE QKEEAKGNDQ NAKRIKEYRQ KVESELSGIC
101: SEIMTVIDEH LIPSSSAGES TVFYYKMKGD YYRYLAEFKS GNEKKEAADQ SLKAYQTAST TAEADLSPTH PIRLGLALNF SVFYYEIMNS PERACHLAKQ
201: AFDEAISELD TLNEESYKDS TLIMQLLRDN LTLWTTDIPG DDEESWKLET SARAGGNENA EVTLVFEVCG GLYLWVFDFC SHGFPL
101: SEIMTVIDEH LIPSSSAGES TVFYYKMKGD YYRYLAEFKS GNEKKEAADQ SLKAYQTAST TAEADLSPTH PIRLGLALNF SVFYYEIMNS PERACHLAKQ
201: AFDEAISELD TLNEESYKDS TLIMQLLRDN LTLWTTDIPG DDEESWKLET SARAGGNENA EVTLVFEVCG GLYLWVFDFC SHGFPL
001: MGSGKERDTF VYLAKLSEQA ERYEEMVESM KSVAKLNVDL TVEERNLLSV GYKNVIGSRR ASWRIFSSIE QKEAVKGNDV NVKRIKEYME KVELELSNIC
101: IDIMSVLDEH LIPSASEGES TVFFNKMKGD YYRYLAEFKS GNERKEAADQ SLKAYEIATT AAEAKLPPTH PIRLGLALNF SVFYYEIMNA PERACHLAKQ
201: AFDEAISELD TLNEESYKDS TLIMQLLRDN LTLWTSDISE EGDDAHKTNG SAKPGAGGDD AE
101: IDIMSVLDEH LIPSASEGES TVFFNKMKGD YYRYLAEFKS GNERKEAADQ SLKAYEIATT AAEAKLPPTH PIRLGLALNF SVFYYEIMNA PERACHLAKQ
201: AFDEAISELD TLNEESYKDS TLIMQLLRDN LTLWTSDISE EGDDAHKTNG SAKPGAGGDD AE
Arabidopsis Description
GRF9General regulatory factor 9 [Source:UniProtKB/TrEMBL;Acc:F4IP55]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.