Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_00s0840g00010.t01 | cytosol |
| VIT_00s1437g00010.t01 | cytosol |
| VIT_06s0004g07020.t01 | nucleus |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G34760.1 | VIT_06s0004g07020.t01 | AT5G58550.1 | 23512855 |
| AT1G34760.1 | VIT_00s0840g00010.t01 | AT5G65800.1 | 23512855 |
| AT1G34760.1 | VIT_00s1437g00010.t01 | AT5G65800.1 | 23512855 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400016422 | Potato | cytosol | 88.49 | 88.49 |
| Solyc04g074230.2.1 | Tomato | extracellular | 86.51 | 81.95 |
| AT1G34760.1 | Thale cress | cytosol | 81.75 | 80.78 |
| CDY38227 | Canola | cytosol | 80.95 | 80.63 |
| Bra031383.1-P | Field mustard | cytosol | 80.56 | 80.24 |
| CDY69181 | Canola | cytosol | 80.56 | 80.24 |
| AT1G22300.1 | Thale cress | cytosol | 80.56 | 79.92 |
| VIT_19s0014g01420.t01 | Wine grape | cytosol | 81.75 | 78.03 |
| VIT_01s0011g00620.t01 | Wine grape | cytosol | 79.76 | 75.85 |
| CDY48771 | Canola | cytosol | 51.98 | 71.98 |
| GSMUA_Achr2P22240_001 | Banana | cytosol | 72.62 | 71.21 |
| VIT_10s0003g01240.t01 | Wine grape | cytosol | 79.37 | 69.93 |
| VIT_14s0006g03230.t01 | Wine grape | cytosol | 69.84 | 67.18 |
| VIT_18s0001g06330.t01 | Wine grape | extracellular | 68.65 | 66.54 |
| VIT_07s0191g00090.t01 | Wine grape | cytosol | 67.06 | 66.27 |
| VIT_18s0001g07240.t01 | Wine grape | cytosol | 65.08 | 65.08 |
| VIT_00s0199g00190.t01 | Wine grape | cytosol | 65.08 | 64.82 |
| CDX91673 | Canola | cytosol | 63.89 | 59.85 |
| EES10091 | Sorghum | cytosol | 57.14 | 58.3 |
| TraesCS4B01G148900.2 | Wheat | cytosol | 55.56 | 56.22 |
| AT1G22290.2 | Thale cress | cytosol | 44.44 | 51.85 |
| HORVU4Hr1G031620.11 | Barley | cytosol | 55.16 | 51.48 |
| TraesCS4A01G167100.1 | Wheat | cytosol | 49.6 | 51.23 |
| CDY03135 | Canola | cytosol | 75.79 | 48.48 |
| Os11t0609600-01 | Rice | cytosol | 32.14 | 40.5 |
| Zm00001d048868_P002 | Maize | extracellular | 57.54 | 33.8 |
| VIT_00s0199g00140.t01 | Wine grape | cytosol | 48.41 | 21.0 |
Protein Annotations
| Gene3D:1.20.190.20 | EntrezGene:100247183 | wikigene:100247183 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf |
| InterPro:14-3-3_domain | MapMan:35.1 | ProteinID:CBI19165 | ProteinID:CBI19165.3 | ncoils:Coil | UniProt:E0CRL1 |
| EMBL:FN595227 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | InterPro:IPR036815 |
| EntrezGene:LOC100247183 | wikigene:LOC100247183 | PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 |
| ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF59 | SMART:SM00101 | SUPFAM:SSF48445 | TIGR:TC55192 |
| UniParc:UPI0001985403 | ArrayExpress:VIT_18s0001g05720 | EnsemblPlantsGene:VIT_18s0001g05720 | EnsemblPlants:VIT_18s0001g05720.t01 | unigene:Vvi.1195 | RefSeq:XP_002285787 |
| RefSeq:XP_002285787.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr18:-:4453327..4457820
Molecular Weight (calculated)
28740.5 Da
IEP (calculated)
4.506
GRAVY (calculated)
-0.663
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEREQQVYL ARLAEQAERY DEMVEAMKKV AKLDVELTVE ERNLVSVGYK NVIGARRASW RILSSIEQKE ETRGNEQNAK RIKDYRQRVE DELSKICNDI
101: LSVIDNHLIP SSSTGESTVF YYKMKGDYYR YLAEFKAGND RKEAADQSLK AYEAATSTAA SDLPPTHPIR LGLALNFSVF YYEILNSPER ACHLAKQAFD
201: EAIAELDSLN EESYKDSTLI MQLLRDNLTL WTSDLPEEGG ETSKADEPQA ES
101: LSVIDNHLIP SSSTGESTVF YYKMKGDYYR YLAEFKAGND RKEAADQSLK AYEAATSTAA SDLPPTHPIR LGLALNFSVF YYEILNSPER ACHLAKQAFD
201: EAIAELDSLN EESYKDSTLI MQLLRDNLTL WTSDLPEEGG ETSKADEPQA ES
001: MENERAKQVY LAKLNEQAER YDEMVEAMKK VAALDVELTI EERNLLSVGY KNVIGARRAS WRILSSIEQK EESKGNEQNA KRIKDYRTKV EEELSKICYD
101: ILAVIDKHLV PFATSGESTV FYYKMKGDYF RYLAEFKSGA DREEAADLSL KAYEAATSSA STELSTTHPI RLGLALNFSV FYYEILNSPE RACHLAKRAF
201: DEAIAELDSL NEDSYKDSTL IMQLLRDNLT LWTSDLEEGG EQSKGHNQQD EVNKI
101: ILAVIDKHLV PFATSGESTV FYYKMKGDYF RYLAEFKSGA DREEAADLSL KAYEAATSSA STELSTTHPI RLGLALNFSV FYYEILNSPE RACHLAKRAF
201: DEAIAELDSL NEDSYKDSTL IMQLLRDNLT LWTSDLEEGG EQSKGHNQQD EVNKI
Arabidopsis Description
GRF11general regulatory factor 11 [Source:TAIR;Acc:AT1G34760]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.