Factsheet for TraesCS4A01G167100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G111500.1	nucleus
TraesCS4A01G256500.1	cytosol
TraesCS4B01G058200.1	cytosol
TraesCS4B01G192300.1	nucleus
TraesCS4D01G058200.1	cytosol
TraesCS4D01G193600.2	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G34760.1	TraesCS4A01G111500.1	AT5G58550.1	23512855
AT1G34760.1	TraesCS4B01G192300.1	AT5G58550.1	23512855
AT1G34760.1	TraesCS4D01G193600.2	AT5G58550.1	23512855
AT1G34760.1	TraesCS4A01G256500.1	AT5G65800.1	23512855
AT1G34760.1	TraesCS4B01G058200.1	AT5G65800.1	23512855
AT1G34760.1	TraesCS4D01G058200.1	AT5G65800.1	23512855

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G148900.2	Wheat	cytosol	83.61	81.93
HORVU4Hr1G031620.11	Barley	cytosol	79.1	71.48
EES10091	Sorghum	cytosol	69.67	68.83
GSMUA_Achr2P22240_001	Banana	cytosol	54.92	52.14
Bra031383.1-P	Field mustard	cytosol	53.28	51.38
CDY69181	Canola	cytosol	53.28	51.38
CDY38227	Canola	cytosol	52.87	50.99
AT1G22300.1	Thale cress	cytosol	52.46	50.39
VIT_18s0001g05720.t01	Wine grape	cytosol	51.23	49.6
AT1G34760.1	Thale cress	cytosol	51.64	49.41
PGSC0003DMT400016422	Potato	cytosol	50.82	49.21
Os11t0609600-01	Rice	cytosol	39.75	48.5
CDY48771	Canola	cytosol	35.66	47.8
Solyc04g074230.2.1	Tomato	extracellular	50.41	46.24
TraesCS4A01G268700.1	Wheat	cytosol	49.18	45.98
TraesCS7A01G295500.1	Wheat	golgi	48.36	45.56
TraesCS3A01G055600.1	Wheat	golgi, plastid	48.36	45.04
TraesCS2A01G337300.1	Wheat	cytosol	47.95	44.49
TraesCS4A01G151000.2	Wheat	cytosol	47.95	43.33
Zm00001d048868_P002	Maize	extracellular	71.31	40.56
CDX91673	Canola	cytosol	43.85	39.78
AT1G22290.2	Thale cress	cytosol	30.33	34.26
CDY03135	Canola	cytosol	46.31	28.68

Protein Annotations

EnsemblPlants:TraesCS4A01G167100.1	EnsemblPlantsGene:TraesCS4A01G167100	Gene3D:1.20.190.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0019904	InterPro:14-3-3	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	InterPro:IPR036815	PANTHER:PTHR18860
PANTHER:PTHR18860:SF58	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	SMART:SM00101	SUPFAM:SSF48445
TIGR:cd08774	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:412259118..412267803

Molecular Weight (calculated)

27252.0 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.084

Length

244 amino acids

Sequence
(BLAST)

001: MVNFMKKLAR MDVDMSAKER HLFSVGFKNT IGARRASWRI LSSLEQKVAV GEQAGQMISV YRMKVEDELR MVCNEILSII AIHCLPLANA GENIVFFHKM
101: KGDYYRYLAE FSIGAEKKSA ADQSLMAYQH AMVIASTELS PAHPIRLGLA LNFSVFFYEI MNFHQRACQV AKQAFDEATT EINSAGMDGN NDSTLMMQLL
201: NDNLALWKSE LTEGKAIKTF SQESTTLPLA FFEESPRGGG GIPT

Best Arabidopsis Sequence Match ( AT1G22300.1 )
(BLAST)

001: MENEREKQVY LAKLSEQTER YDEMVEAMKK VAQLDVELTV EERNLVSVGY KNVIGARRAS WRILSSIEQK EESKGNDENV KRLKNYRKRV EDELAKVCND
101: ILSVIDKHLI PSSNAVESTV FFYKMKGDYY RYLAEFSSGA ERKEAADQSL EAYKAAVAAA ENGLAPTHPV RLGLALNFSV FYYEILNSPE SACQLAKQAF
201: DDAIAELDSL NEESYKDSTL IMQLLRDNLT LWTSDLNEEG DERTKGADEP QDEN

Arabidopsis Description

GRF10GRF10 [Source:UniProtKB/TrEMBL;Acc:A0A178W0Z4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.