Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G292000.1 | |
| TraesCS7B01G183000.7 | |
| TraesCS7D01G288000.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G38480.1 | TraesCS7A01G292000.1 | AT2G18876.1 | 21798944 |
| AT5G38480.1 | TraesCS7B01G183000.7 | AT2G18876.1 | 21798944 |
| AT5G38480.1 | TraesCS7D01G288000.2 | AT2G18876.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G155900.1 | Wheat | plastid | 96.67 | 98.12 |
| TraesCS4B01G159900.1 | Wheat | cytosol | 97.78 | 96.7 |
| OQU83613 | Sorghum | cytosol | 91.48 | 92.86 |
| Os11t0546900-01 | Rice | plasma membrane | 90.37 | 92.08 |
| Zm00001d053090_P001 | Maize | plastid | 90.74 | 91.42 |
| GSMUA_Achr9P28460_001 | Banana | cytosol | 43.7 | 89.39 |
| Zm00001d007446_P003 | Maize | cytosol | 90.37 | 88.41 |
| HORVU4Hr1G043300.1 | Barley | cytosol | 96.67 | 87.0 |
| Solyc03g034180.2.1 | Tomato | cytosol | 79.26 | 82.95 |
| TraesCS4A01G268700.1 | Wheat | cytosol | 80.0 | 82.76 |
| VIT_14s0006g03230.t01 | Wine grape | cytosol | 79.26 | 81.68 |
| CDX74252 | Canola | cytosol | 78.89 | 81.61 |
| Solyc02g063070.2.1 | Tomato | plastid | 78.52 | 81.54 |
| PGSC0003DMT400062153 | Potato | cytosol | 78.52 | 81.54 |
| KRH01783 | Soybean | nucleus | 77.41 | 81.32 |
| TraesCS3A01G055600.1 | Wheat | golgi, plastid | 78.89 | 81.3 |
| Bra001049.1-P | Field mustard | cytosol | 78.52 | 81.23 |
| Bra040592.1-P | Field mustard | cytosol | 78.15 | 80.84 |
| CDY51543 | Canola | cytosol | 78.15 | 80.84 |
| CDY28698 | Canola | cytosol | 78.15 | 80.84 |
| TraesCS2A01G337300.1 | Wheat | cytosol | 78.15 | 80.23 |
| CDX91996 | Canola | cytosol | 77.41 | 80.08 |
| AT3G02520.2 | Thale cress | cytosol | 78.15 | 79.62 |
| Bra028409.1-P | Field mustard | cytosol | 75.93 | 79.46 |
| Zm00001d048554_P001 | Maize | cytosol | 57.78 | 79.19 |
| CDX67405 | Canola | cytosol | 75.56 | 79.07 |
| Bra028187.1-P | Field mustard | cytosol | 75.19 | 78.99 |
| CDX74521 | Canola | cytosol | 75.19 | 78.99 |
| AT5G38480.1 | Thale cress | cytosol | 74.44 | 78.82 |
| CDY01659 | Canola | cytosol | 74.81 | 78.6 |
| CDY71290 | Canola | cytosol | 74.81 | 78.6 |
| KRH46909 | Soybean | cytosol | 75.19 | 78.08 |
| PGSC0003DMT400050389 | Potato | cytosol | 74.81 | 77.69 |
| AT5G16050.2 | Thale cress | cytosol | 75.93 | 76.49 |
| Zm00001d021885_P001 | Maize | mitochondrion | 46.67 | 76.36 |
| Zm00001d033357_P001 | Maize | cytosol | 57.41 | 74.16 |
| TraesCS7A01G295500.1 | Wheat | golgi | 71.11 | 74.13 |
| Zm00001d007968_P001 | Maize | cytosol | 56.67 | 73.21 |
| Zm00001d017434_P001 | Maize | cytosol | 56.67 | 73.21 |
| HORVU4Hr1G031770.1 | Barley | cytosol, plastid | 41.48 | 65.5 |
| Zm00001d018856_P001 | Maize | cytosol, plastid | 61.11 | 54.64 |
| TraesCS4A01G167100.1 | Wheat | cytosol | 43.33 | 47.95 |
| Zm00001d039042_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 61.11 | 40.54 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G151000.2 | EnsemblPlantsGene:TraesCS4A01G151000 | Gene3D:1.20.190.20 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0019904 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | InterPro:IPR036815 |
| ncoils:Coil | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF34 | PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 |
| ScanProsite:PS00796 | ScanProsite:PS00797 | SMART:SM00101 | SUPFAM:SSF48445 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4A:-:299599686..299602478
Molecular Weight (calculated)
29899.0 Da
IEP (calculated)
4.478
GRAVY (calculated)
-0.479
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPAEQTRDE SVYMAKLAEQ AERYEEMVEF MERVAKATGG AGPGEELSVE ERNLLSVAYK NVIGARRASW RIISSIEQKE EGRGNDAHAA TIRSYRSKIE
101: AELAKICDGI LALLDSHLVP SAGAAESKVF YLKMKGDYHR YLAEFKSGGE RKEAAESTMN AYKAAQVTDK DIALVDLAPT HPIRLGLALN FSVFYYEILN
201: SPDRACNLAK QAFDEAISEL DSLGEESYKD STLIMQLLRD NLTLWTSDTN EDDVDEIKEA PAPKESGDGQ
101: AELAKICDGI LALLDSHLVP SAGAAESKVF YLKMKGDYHR YLAEFKSGGE RKEAAESTMN AYKAAQVTDK DIALVDLAPT HPIRLGLALN FSVFYYEILN
201: SPDRACNLAK QAFDEAISEL DSLGEESYKD STLIMQLLRD NLTLWTSDTN EDDVDEIKEA PAPKESGDGQ
001: MAAPPASSSA REEFVYLAKL AEQAERYEEM VEFMEKVAEA VDKDELTVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE SRGNDDHVTT IRDYRSKIES
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
Arabidopsis Description
GF14 PHIGF14 protein phi chain [Source:UniProtKB/TrEMBL;Acc:F4HWQ5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.