Factsheet for Zm00001d021885_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d050216_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38480.1	Zm00001d050216_P003	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033357_P001	Maize	cytosol	92.12	72.73
Zm00001d017434_P001	Maize	cytosol	90.91	71.77
Zm00001d007968_P001	Maize	cytosol	90.91	71.77
Zm00001d048554_P001	Maize	cytosol	78.18	65.48
Zm00001d013429_P001	Maize	extracellular	37.58	53.45
Zm00001d018856_P001	Maize	cytosol, plastid	95.76	52.32
Zm00001d053090_P001	Maize	plastid	81.21	50.0
OQU83613	Sorghum	cytosol	80.61	50.0
Zm00001d007446_P003	Maize	cytosol	81.82	48.91
Os11t0546900-01	Rice	plasma membrane	76.36	47.55
TraesCS4D01G155900.1	Wheat	plastid	76.36	47.37
TraesCS4A01G151000.2	Wheat	cytosol	76.36	46.67
TraesCS4B01G159900.1	Wheat	cytosol	76.97	46.52
Bra001049.1-P	Field mustard	cytosol	69.7	44.06
CDY51543	Canola	cytosol	69.09	43.68
Bra040592.1-P	Field mustard	cytosol	69.09	43.68
CDX74252	Canola	cytosol	69.09	43.68
Zm00001d050375_P001	Maize	cytosol	67.27	43.36
CDX91996	Canola	cytosol	68.48	43.3
Zm00001d025617_P006	Maize	cytosol	68.48	43.3
CDY28698	Canola	cytosol	68.48	43.3
Solyc03g034180.2.1	Tomato	cytosol	67.27	43.02
Zm00001d031688_P001	Maize	cytosol, extracellular, mitochondrion	66.67	42.8
KRH01783	Soybean	nucleus	66.67	42.8
PGSC0003DMT400050389	Potato	cytosol	67.27	42.69
KRH46909	Soybean	cytosol	67.27	42.69
HORVU4Hr1G043300.1	Barley	cytosol	77.58	42.67
AT3G02520.2	Thale cress	cytosol	68.48	42.64
Zm00001d032231_P001	Maize	cytosol	66.06	42.58
Zm00001d052698_P001	Maize	plasma membrane	64.85	42.46
Zm00001d038649_P002	Maize	cytosol	66.06	42.41
Bra028409.1-P	Field mustard	cytosol	66.06	42.25
CDX74521	Canola	cytosol	65.45	42.02
CDY01659	Canola	cytosol	65.45	42.02
AT5G38480.1	Thale cress	cytosol	64.85	41.96
Solyc02g063070.2.1	Tomato	plastid	66.06	41.92
PGSC0003DMT400062153	Potato	cytosol	66.06	41.92
CDX67405	Canola	cytosol	65.45	41.86
Zm00001d036226_P001	Maize	cytosol	64.85	41.63
CDY71290	Canola	cytosol	64.85	41.63
VIT_14s0006g03230.t01	Wine grape	cytosol	66.06	41.6
HORVU4Hr1G031770.1	Barley	cytosol, plastid	43.03	41.52
Bra028187.1-P	Field mustard	cytosol	64.24	41.25
Zm00001d003401_P003	Maize	cytosol	67.88	41.18
AT5G16050.2	Thale cress	cytosol	66.06	40.67
Zm00001d052796_P003	Maize	cytosol	59.39	36.43
Zm00001d034593_P001	Maize	cytosol	64.85	33.33
Zm00001d039042_P001	Maize	cytosol, nucleus, plasma membrane, plastid	76.97	31.2
GSMUA_Achr9P28460_001	Banana	cytosol	23.64	29.55
Zm00001d006462_P001	Maize	cytosol	20.61	22.82
Zm00001d035316_P001	Maize	cytosol	14.55	16.11
Zm00001d048868_P002	Maize	extracellular	37.58	14.45
Zm00001d015779_P001	Maize	nucleus	12.73	11.8
Zm00001d028091_P001	Maize	cytosol	10.91	10.23

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
UniProt:A0A1D6IHH8	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0016853
GO:GO:0019904	InterPro:IPR036815	ProteinID:ONM58956.1	PFAM:PF00244	PRINTS:PR00305	ScanProsite:PS00796
PANTHER:PTHR18860	PANTHER:PTHR18860:SF34	SMART:SM00101	SUPFAM:SSF48445	UniParc:UPI000843930D	EnsemblPlantsGene:Zm00001d021885
EnsemblPlants:Zm00001d021885_P001	EnsemblPlants:Zm00001d021885_T001	SEG:seg	:	:	:

Description

triose phosphate isomerase1 triose phosphate isomerase1

Coordinates

chr7:-:165356591..165357406

Molecular Weight (calculated)

18022.4 Da

IEP (calculated)

9.362

GRAVY (calculated)

-0.398

Length

165 amino acids

Sequence
(BLAST)

001: MCNRSIKKSR AYSLISSPKS GGGEELSVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE GRGNEAHAAS IRAYRSKIET ELARICDGIL ALLDSHLVPS
101: AGGAESKVFY LKMKGDYHRY LAEFKSGAER KDAAESTMNA YKAAQDIALA DLALLSTSQC STTRS

Best Arabidopsis Sequence Match ( AT1G78300.1 )
(BLAST)

001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ

Arabidopsis Description

GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.