Factsheet for Zm00001d039042_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d050216_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38480.1	Zm00001d050216_P003	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048554_P001	Maize	cytosol	37.84	78.17
Zm00001d021885_P001	Maize	mitochondrion	31.2	76.97
Zm00001d033357_P001	Maize	cytosol	39.07	76.08
Zm00001d017434_P001	Maize	cytosol	38.82	75.6
Zm00001d007968_P001	Maize	cytosol	38.57	75.12
OQU83613	Sorghum	cytosol	42.75	65.41
Zm00001d053090_P001	Maize	plastid	42.75	64.93
Zm00001d007446_P003	Maize	cytosol	43.24	63.77
Os11t0546900-01	Rice	plasma membrane	40.79	62.64
TraesCS4D01G155900.1	Wheat	plastid	40.54	62.03
TraesCS4B01G159900.1	Wheat	cytosol	41.28	61.54
TraesCS4A01G151000.2	Wheat	cytosol	40.54	61.11
KRH46909	Soybean	cytosol	38.33	60.0
Solyc03g034180.2.1	Tomato	cytosol	37.84	59.69
KRH01783	Soybean	nucleus	37.59	59.53
AT5G38480.1	Thale cress	cytosol	36.61	58.43
CDY01659	Canola	cytosol	36.85	58.37
CDX74521	Canola	cytosol	36.85	58.37
GSMUA_Achr9P28460_001	Banana	cytosol	18.92	58.33
Zm00001d050375_P001	Maize	cytosol	36.61	58.2
Bra028409.1-P	Field mustard	cytosol	36.85	58.14
PGSC0003DMT400062153	Potato	cytosol	37.1	58.08
CDY71290	Canola	cytosol	36.61	57.98
Zm00001d018856_P001	Maize	cytosol, plastid	43.0	57.95
Zm00001d032231_P001	Maize	cytosol	36.36	57.81
CDX67405	Canola	cytosol	36.61	57.75
PGSC0003DMT400050389	Potato	cytosol	36.85	57.69
Solyc02g063070.2.1	Tomato	plastid	36.85	57.69
VIT_14s0006g03230.t01	Wine grape	cytosol	37.1	57.63
Bra028187.1-P	Field mustard	cytosol	36.36	57.59
CDY51543	Canola	cytosol	36.85	57.47
Bra040592.1-P	Field mustard	cytosol	36.85	57.47
CDY28698	Canola	cytosol	36.61	57.09
Bra001049.1-P	Field mustard	cytosol	36.61	57.09
CDX91996	Canola	cytosol	36.61	57.09
Zm00001d031688_P001	Maize	cytosol, extracellular, mitochondrion	35.87	56.81
CDX74252	Canola	cytosol	36.36	56.7
Zm00001d025617_P006	Maize	cytosol	36.36	56.7
Zm00001d038649_P002	Maize	cytosol	35.38	56.03
AT3G02520.2	Thale cress	cytosol	36.36	55.85
HORVU4Hr1G043300.1	Barley	cytosol	41.03	55.67
Zm00001d036226_P001	Maize	cytosol	35.14	55.64
Zm00001d052698_P001	Maize	plasma membrane	34.15	55.16
AT5G16050.2	Thale cress	cytosol	35.63	54.1
Zm00001d003401_P003	Maize	cytosol	36.12	54.04
Zm00001d052796_P003	Maize	cytosol	33.17	50.19
Zm00001d013429_P001	Maize	extracellular	13.76	48.28
Zm00001d006462_P001	Maize	cytosol	16.71	45.64
Zm00001d034593_P001	Maize	cytosol	33.91	42.99
HORVU4Hr1G031770.1	Barley	cytosol, plastid	17.69	42.11
Zm00001d028091_P001	Maize	cytosol	14.0	32.39
Zm00001d035316_P001	Maize	cytosol	9.34	25.5
Zm00001d015779_P001	Maize	nucleus	9.09	20.79
Zm00001d048868_P002	Maize	extracellular	21.38	20.28

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
UniProt:A0A1D6MD05	ProteinID:AQK88565.1	InterPro:COR413	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0019904	InterPro:IPR036815	PFAM:PF00244
PFAM:PF05562	PRINTS:PR00305	ScanProsite:PS00796	PANTHER:PTHR18860	PANTHER:PTHR18860:SF34	SMART:SM00101
SUPFAM:SSF48445	TMHMM:TMhelix	UniParc:UPI000844D0E2	EnsemblPlantsGene:Zm00001d039042	EnsemblPlants:Zm00001d039042_P001	EnsemblPlants:Zm00001d039042_T001

Description

14-3-3-like protein GF14 nu

Coordinates

chr6:-:169143130..169157350

Molecular Weight (calculated)

45467.1 Da

IEP (calculated)

9.661

GRAVY (calculated)

-0.044

Length

407 amino acids

Sequence
(BLAST)

001: MCNRSIKKSR AYSLISSPKS GGVEELSVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE GRGNEAHAAS IRAYRSKIET ELARICDGIL ALLDSHLILS
101: AGGAESKVFY LKMKGDYHRG MRLPVKTSSN RSGAERKDAA ESTMNAYKAA QDIALADLAP THPIRLGLAL NFSVFYYEIL NSPDRACNLA KQAVELIDAE
201: IAQSFSQQRK KREGGGPTYH ETFAYAQGSF ARVPEAYVLS LGIYLLPNRE CTRTLFTCGI PTIKMWEQQV LPTTELGSED TVIAQFLRYL LILDRTNWKT
301: NMLTALLVPY IFFTLPNVLF SLIRLVRASR FHHPAHSGRP SLFAHTFRDD LVGVFICLAI GCYLLQEHIR ASDGLRNAFR KGNGVSNSIG ILLLFIYPVW
401: TGVLRIL

Best Arabidopsis Sequence Match ( AT3G02520.1 )
(BLAST)

001: MSSSREENVY LAKLAEQAER YEEMVEFMEK VAKTVDTDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVSIIKDYRG KIETELSKIC
101: DGILNLLDSH LVPTASLAES KVFYLKMKGD YHRYLAEFKT GAERKEAAES TLVAYKSAQD IALADLAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDEAISELD TLGEESYKDS TLIMQLLRDN LTLWNSDIND EAGGDEIKEA SKHEPEEGKP AETGQ

Arabidopsis Description

GRF714-3-3-like protein GF14 nu [Source:UniProtKB/Swiss-Prot;Acc:Q96300]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.