Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d028769_P004 | nucleus |
| Zm00001d033862_P001 | cytosol |
| Zm00001d047721_P001 | nucleus |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G34760.1 | Zm00001d028769_P004 | AT5G58550.1 | 23512855 |
| AT1G34760.1 | Zm00001d047721_P001 | AT5G58550.1 | 23512855 |
| AT1G34760.1 | Zm00001d033862_P001 | AT5G65800.1 | 23512855 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES10091 | Sorghum | cytosol | 54.78 | 95.14 |
| TraesCS4B01G148900.2 | Wheat | cytosol | 45.45 | 78.31 |
| TraesCS4A01G167100.1 | Wheat | cytosol | 40.56 | 71.31 |
| HORVU4Hr1G031620.11 | Barley | cytosol | 43.59 | 69.26 |
| GSMUA_Achr2P22240_001 | Banana | cytosol | 35.9 | 59.92 |
| PGSC0003DMT400016422 | Potato | cytosol | 34.03 | 57.94 |
| VIT_18s0001g05720.t01 | Wine grape | cytosol | 33.8 | 57.54 |
| Bra031383.1-P | Field mustard | cytosol | 33.8 | 57.31 |
| CDY69181 | Canola | cytosol | 33.8 | 57.31 |
| CDY38227 | Canola | cytosol | 33.57 | 56.92 |
| AT1G22300.1 | Thale cress | cytosol | 33.33 | 56.3 |
| Os11t0609600-01 | Rice | cytosol | 26.11 | 56.0 |
| AT1G34760.1 | Thale cress | cytosol | 33.1 | 55.69 |
| Solyc04g074230.2.1 | Tomato | extracellular | 34.03 | 54.89 |
| Zm00001d035316_P001 | Maize | cytosol | 18.41 | 53.02 |
| Zm00001d032231_P001 | Maize | cytosol | 29.84 | 50.0 |
| Zm00001d025617_P006 | Maize | cytosol | 30.3 | 49.81 |
| Zm00001d050375_P001 | Maize | cytosol | 29.6 | 49.61 |
| CDY48771 | Canola | cytosol | 20.98 | 49.45 |
| Zm00001d053090_P001 | Maize | plastid | 30.54 | 48.88 |
| Zm00001d031688_P001 | Maize | cytosol, extracellular, mitochondrion | 29.14 | 48.64 |
| Zm00001d006462_P001 | Maize | cytosol | 16.78 | 48.32 |
| Zm00001d038649_P002 | Maize | cytosol | 28.9 | 48.25 |
| Zm00001d052698_P001 | Maize | plasma membrane | 28.21 | 48.02 |
| Zm00001d003401_P003 | Maize | cytosol | 30.3 | 47.79 |
| Zm00001d036226_P001 | Maize | cytosol | 28.44 | 47.47 |
| Zm00001d007446_P003 | Maize | cytosol | 30.54 | 47.46 |
| Zm00001d052796_P003 | Maize | cytosol | 29.37 | 46.84 |
| CDX91673 | Canola | cytosol | 28.67 | 45.72 |
| Zm00001d048554_P001 | Maize | cytosol | 19.35 | 42.13 |
| Zm00001d033357_P001 | Maize | cytosol | 19.58 | 40.19 |
| Zm00001d007968_P001 | Maize | cytosol | 19.11 | 39.23 |
| Zm00001d017434_P001 | Maize | cytosol | 19.11 | 39.23 |
| Zm00001d013429_P001 | Maize | extracellular | 10.49 | 38.79 |
| AT1G22290.2 | Thale cress | cytosol | 19.11 | 37.96 |
| Zm00001d021885_P001 | Maize | mitochondrion | 14.45 | 37.58 |
| Zm00001d028091_P001 | Maize | cytosol | 15.15 | 36.93 |
| Zm00001d034593_P001 | Maize | cytosol | 25.41 | 33.96 |
| CDY03135 | Canola | cytosol | 30.3 | 32.99 |
| Zm00001d018856_P001 | Maize | cytosol, plastid | 21.45 | 30.46 |
| Zm00001d015779_P001 | Maize | nucleus | 11.42 | 27.53 |
| Zm00001d039042_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 20.28 | 21.38 |
Protein Annotations
| EnsemblPlants:Zm00001d048868_P002 | EnsemblPlants:Zm00001d048868_T002 | EnsemblPlantsGene:Zm00001d048868 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0019904 | InterPro:14-3-3 | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | InterPro:IPR036815 | PANTHER:PTHR18860 |
| PANTHER:PTHR18860:SF58 | PFAM:PF00244 | PRINTS:PR00305 | ProteinID:AQK49072.1 | SEG:seg | SMART:SM00101 |
| SUPFAM:SSF48445 | UniParc:UPI0008449828 | UniProt:A0A1D6PQP0 | MapMan:35.1 | : | : |
Description
14-3-3-like protein GF14 epsilon
Coordinates
chr4:-:6760654..6765415
Molecular Weight (calculated)
47392.6 Da
IEP (calculated)
8.406
GRAVY (calculated)
-0.493
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGEQKGNDR GGGREKISGL EKRVAMVTLK DVTPSRVGQR EAPNCQSVTI RATLKNNPGS SSCCSAANQT PRHHLYDGLH RQETEPSGPK SRKGQATSTA
101: QHSTSTPSVL GRRGEGNPGP GRVVGRGSAA EEMEEREKLV CLAKLAEQAE RYDGFVNLGL VGQHIDLSTN RNLLPPNNQF SCHLPLSLSN LRTFRNMVEF
201: MKNLARMDVD MSAEERHLFS VGFKNTIGAK RASWRIICSH EQKVAADRQT GVMIDAYKKK VEEELRKVCN EVLSVIAIHC LPLASTGENI VFFYKMKGDY
301: YRYLAEFSTG TEKKAASDQS LMAYQHAMVV ASSELSPAHQ IRLGLALNLS VFFYEIMNSH ERACQVAKQA FDEALTEINS GEGVYKDSTL MMQLLKDNLA
401: LWTSELTGGE ASKGNGDVDM EVRRPCPMT
101: QHSTSTPSVL GRRGEGNPGP GRVVGRGSAA EEMEEREKLV CLAKLAEQAE RYDGFVNLGL VGQHIDLSTN RNLLPPNNQF SCHLPLSLSN LRTFRNMVEF
201: MKNLARMDVD MSAEERHLFS VGFKNTIGAK RASWRIICSH EQKVAADRQT GVMIDAYKKK VEEELRKVCN EVLSVIAIHC LPLASTGENI VFFYKMKGDY
301: YRYLAEFSTG TEKKAASDQS LMAYQHAMVV ASSELSPAHQ IRLGLALNLS VFFYEIMNSH ERACQVAKQA FDEALTEINS GEGVYKDSTL MMQLLKDNLA
401: LWTSELTGGE ASKGNGDVDM EVRRPCPMT
001: MENEREKQVY LAKLSEQTER YDEMVEAMKK VAQLDVELTV EERNLVSVGY KNVIGARRAS WRILSSIEQK EESKGNDENV KRLKNYRKRV EDELAKVCND
101: ILSVIDKHLI PSSNAVESTV FFYKMKGDYY RYLAEFSSGA ERKEAADQSL EAYKAAVAAA ENGLAPTHPV RLGLALNFSV FYYEILNSPE SACQLAKQAF
201: DDAIAELDSL NEESYKDSTL IMQLLRDNLT LWTSDLNEEG DERTKGADEP QDEN
101: ILSVIDKHLI PSSNAVESTV FFYKMKGDYY RYLAEFSSGA ERKEAADQSL EAYKAAVAAA ENGLAPTHPV RLGLALNFSV FYYEILNSPE SACQLAKQAF
201: DDAIAELDSL NEESYKDSTL IMQLLRDNLT LWTSDLNEEG DERTKGADEP QDEN
Arabidopsis Description
GRF10GRF10 [Source:UniProtKB/TrEMBL;Acc:A0A178W0Z4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.