CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031383.1-P	Field mustard	cytosol	91.76	66.01
CDY69181	Canola	cytosol	91.76	66.01
CDY38227	Canola	cytosol	91.21	65.61
VIT_18s0001g05720.t01	Wine grape	cytosol	71.98	51.98
PGSC0003DMT400016422	Potato	cytosol	71.98	51.98
CDY40251	Canola	cytosol	68.13	50.61
Solyc04g074230.2.1	Tomato	extracellular	70.33	48.12
CDX85023	Canola	cytosol	68.68	46.3
CDY16161	Canola	cytosol	68.13	46.1
CDY20560	Canola	cytosol	67.03	45.69
CDX91673	Canola	cytosol	66.48	44.98
CDY61201	Canola	cytosol	65.38	43.75
CDY42826	Canola	cytosol	64.84	43.54
CDX97016	Canola	cytosol	53.85	42.98
CDY08794	Canola	cytosol	58.24	42.74
GSMUA_Achr2P22240_001	Banana	cytosol	59.89	42.41
CDY01659	Canola	cytosol	59.89	42.41
CDX74521	Canola	cytosol	59.89	42.41
CDY14562	Canola	cytosol	57.69	42.34
CDY71290	Canola	cytosol	59.34	42.02
CDX67405	Canola	cytosol	59.34	41.86
CDX81287	Canola	cytosol	57.14	41.77
CDY54716	Canola	cytosol	57.14	41.77
CDX81179	Canola	cytosol	56.04	40.8
CDX78381	Canola	cytosol	56.04	40.8
CDX91996	Canola	cytosol	58.24	40.61
CDY40098	Canola	cytosol	54.95	40.32
CDX85759	Canola	cytosol	54.95	40.32
CDY12024	Canola	cytosol	57.69	40.23
CDY51543	Canola	cytosol	57.14	39.85
CDX74252	Canola	cytosol	57.14	39.85
CDY28698	Canola	cytosol	57.14	39.85
CDX73313	Canola	cytosol	57.69	39.62
CDY41483	Canola	cytosol	56.04	39.38
CDX79255	Canola	cytosol	56.04	39.23
CDX68022	Canola	cytosol	56.04	39.23
CDX88436	Canola	cytosol	56.04	39.23
CDY28408	Canola	cytosol	56.59	39.16
CDX91676	Canola	cytosol	55.49	39.0
CDY14618	Canola	cytosol	55.49	38.85
CDY00447	Canola	cytosol	54.95	38.46
CDY46646	Canola	cytosol	54.4	38.08
AT1G22290.2	Thale cress	cytosol	44.51	37.5
CDY61631	Canola	cytosol	67.03	37.2
CDY24128	Canola	cytosol	66.48	36.89
EES10091	Sorghum	cytosol	49.45	36.44
TraesCS4B01G148900.2	Wheat	cytosol	48.9	35.74
TraesCS4A01G167100.1	Wheat	cytosol	47.8	35.66
CDX97014	Canola	cytosol, plastid	21.43	35.45
CDX88428	Canola	cytosol	46.7	35.27
CDX87455	Canola	cytosol	56.04	34.11
CDX87464	Canola	cytosol	36.81	31.6
HORVU4Hr1G031620.11	Barley	cytosol	46.15	31.11
CDY03135	Canola	cytosol	62.64	28.93
CDY56386	Canola	mitochondrion	29.67	27.41
CDY52206	Canola	mitochondrion	29.67	27.41
Zm00001d048868_P002	Maize	extracellular	49.45	20.98
Os11t0609600-01	Rice	cytosol	20.88	19.0

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
GO:A0A078IFH3	UniProt:A0A078IFH3	EnsemblPlants:CDY48771	ProteinID:CDY48771	ProteinID:CDY48771.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	EnsemblPlantsGene:GSBRNA2T00091682001	InterPro:IPR036815
PFAM:PF00244	PRINTS:PR00305	ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF32	SMART:SM00101
SUPFAM:SSF48445	UniParc:UPI0004EE965E	SEG:seg	:	:	:

Description

BnaC04g02240DBnaC04g02240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFH3]

Coordinates

chrLK032790:+:97894..98542

Molecular Weight (calculated)

20531.8 Da

IEP (calculated)

4.340

GRAVY (calculated)

-0.691

Length

182 amino acids

Sequence
(BLAST)

001: MFVNVQVEKA TTTNEESKGN EENVKRIQNY RKKVEDELAK VCNDILSVID KHLIPSSTAV ESTVFFYKMK GDYYRYLAEF SSGAERKEAA DQSIEAYKAA
101: VAAAETGLAP THPILNSPER ACQLAKQAFD DAIAELDSLN EESYKDSTLI MQLLRDNLTL WTSDLPEEGD ERAKRDEPQE EN

Best Arabidopsis Sequence Match ( AT1G22300.1 )
(BLAST)

001: MENEREKQVY LAKLSEQTER YDEMVEAMKK VAQLDVELTV EERNLVSVGY KNVIGARRAS WRILSSIEQK EESKGNDENV KRLKNYRKRV EDELAKVCND
101: ILSVIDKHLI PSSNAVESTV FFYKMKGDYY RYLAEFSSGA ERKEAADQSL EAYKAAVAAA ENGLAPTHPV RLGLALNFSV FYYEILNSPE SACQLAKQAF
201: DDAIAELDSL NEESYKDSTL IMQLLRDNLT LWTSDLNEEG DERTKGADEP QDEN

Arabidopsis Description

GRF10GRF10 [Source:UniProtKB/TrEMBL;Acc:A0A178W0Z4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.