Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85759 | Canola | cytosol | 100.0 | 100.0 |
| CDX78381 | Canola | cytosol | 95.16 | 94.4 |
| CDX81179 | Canola | cytosol | 95.16 | 94.4 |
| CDX97016 | Canola | cytosol | 84.27 | 91.67 |
| CDY14562 | Canola | cytosol | 89.92 | 89.92 |
| CDY54716 | Canola | cytosol | 89.92 | 89.56 |
| CDX81287 | Canola | cytosol | 89.92 | 89.56 |
| CDY08794 | Canola | cytosol | 89.52 | 89.52 |
| Bra028586.1-P | Field mustard | cytosol | 98.39 | 88.73 |
| VIT_18s0001g07240.t01 | Wine grape | cytosol | 86.29 | 84.92 |
| Solyc11g010470.1.1 | Tomato | extracellular, nucleus | 84.68 | 84.34 |
| PGSC0003DMT400041634 | Potato | cytosol | 84.68 | 84.34 |
| AT5G10450.4 | Thale cress | cytosol | 91.53 | 83.15 |
| VIT_00s0199g00190.t01 | Wine grape | cytosol | 83.06 | 81.42 |
| GSMUA_Achr3P06740_001 | Banana | cytosol | 70.16 | 78.38 |
| CDX74521 | Canola | cytosol | 76.61 | 73.93 |
| CDY01659 | Canola | cytosol | 76.61 | 73.93 |
| CDX67405 | Canola | cytosol | 75.81 | 72.87 |
| CDY71290 | Canola | cytosol | 75.4 | 72.76 |
| CDX88436 | Canola | cytosol | 75.0 | 71.54 |
| CDX79255 | Canola | cytosol | 75.0 | 71.54 |
| CDX68022 | Canola | cytosol | 75.0 | 71.54 |
| CDY51543 | Canola | cytosol | 75.0 | 71.26 |
| CDX91996 | Canola | cytosol | 75.0 | 71.26 |
| CDY28698 | Canola | cytosol | 74.6 | 70.88 |
| CDY14618 | Canola | cytosol | 74.19 | 70.77 |
| CDY28408 | Canola | cytosol | 75.0 | 70.72 |
| CDX73313 | Canola | cytosol | 75.4 | 70.57 |
| CDY12024 | Canola | cytosol | 74.19 | 70.5 |
| CDX74252 | Canola | cytosol | 74.19 | 70.5 |
| EES14338 | Sorghum | cytosol | 72.58 | 69.5 |
| CDX91676 | Canola | cytosol | 72.18 | 69.11 |
| CDY41483 | Canola | cytosol | 72.18 | 69.11 |
| Os08t0480800-01 | Rice | plasma membrane | 73.39 | 68.94 |
| TraesCS7B01G183800.1 | Wheat | plastid | 71.77 | 68.2 |
| TraesCS7A01G295500.1 | Wheat | golgi | 70.97 | 67.95 |
| TraesCS7D01G292400.1 | Wheat | cytosol | 71.37 | 67.82 |
| CDY00447 | Canola | cytosol | 70.97 | 67.69 |
| CDY46646 | Canola | cytosol | 70.16 | 66.92 |
| Zm00001d052796_P003 | Maize | cytosol | 70.97 | 65.43 |
| CDX87455 | Canola | cytosol | 75.0 | 62.21 |
| CDY69181 | Canola | cytosol | 62.9 | 61.66 |
| CDY38227 | Canola | cytosol | 62.5 | 61.26 |
| Zm00001d006462_P001 | Maize | cytosol | 35.08 | 58.39 |
| CDY61201 | Canola | cytosol | 62.9 | 57.35 |
| CDY16161 | Canola | cytosol | 62.1 | 57.25 |
| CDX85023 | Canola | cytosol | 62.1 | 57.04 |
| CDY42826 | Canola | cytosol | 62.1 | 56.83 |
| CDY40251 | Canola | cytosol | 55.65 | 56.33 |
| CDY48771 | Canola | cytosol | 40.32 | 54.95 |
| CDY20560 | Canola | cytosol | 55.65 | 51.69 |
| CDY24128 | Canola | cytosol | 62.9 | 47.56 |
| CDY61631 | Canola | cytosol | 62.9 | 47.56 |
| CDX97014 | Canola | cytosol, plastid | 20.97 | 47.27 |
| CDX91673 | Canola | cytosol | 49.19 | 45.35 |
| CDX88428 | Canola | cytosol | 43.15 | 44.4 |
| CDY56386 | Canola | mitochondrion | 35.08 | 44.16 |
| CDY52206 | Canola | mitochondrion | 35.08 | 44.16 |
| CDX87464 | Canola | cytosol | 37.5 | 43.87 |
| CDY03135 | Canola | cytosol | 58.06 | 36.55 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| GO:A0A078HTM7 | UniProt:A0A078HTM7 | EnsemblPlants:CDY40098 | ProteinID:CDY40098 | ProteinID:CDY40098.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | EnsemblPlantsGene:GSBRNA2T00069017001 | InterPro:IPR036815 |
| PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 |
| PANTHER:PTHR18860:SF27 | SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI000199A3EC | SEG:seg | : |
Description
BnaC02g00320DBnaA02g00540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTM7]
Coordinates
chrLK032463:-:191748..193190
Molecular Weight (calculated)
27993.2 Da
IEP (calculated)
4.427
GRAVY (calculated)
-0.340
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATLGRDQY VYMAKLAEQA ERYEEMVNFM EKLVTGATPS SELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NEEHVALVKD YRSKVETELS
101: SVCEGILKLL EENLIPSAAA SESKVFYLKM KGDYHRYMAE FKAGEERKAA AEDTMVAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACDM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA
101: SVCEGILKLL EENLIPSAAA SESKVFYLKM KGDYHRYMAE FKAGEERKAA AEDTMVAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACDM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA
001: MAATLGRDQY VYMAKLAEQA ERYEEMVQFM EQLVTGATPA EELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NDEHVSLVKD YRSKVESELS
101: SVCSGILKLL DSHLIPSAGA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMLAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACNM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQVFTSLYAV PRYSTPFE
101: SVCSGILKLL DSHLIPSAGA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMLAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACNM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQVFTSLYAV PRYSTPFE
Arabidopsis Description
GRF6G-box regulating factor 6 [Source:TAIR;Acc:AT5G10450]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.