Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008355.1-P | Field mustard | cytosol | 96.15 | 100.0 |
| CDX68022 | Canola | cytosol | 96.15 | 96.15 |
| CDX79255 | Canola | cytosol | 96.15 | 96.15 |
| CDX88436 | Canola | cytosol | 94.23 | 94.23 |
| AT1G78300.1 | Thale cress | cytosol | 93.46 | 93.82 |
| CDY12024 | Canola | cytosol | 88.08 | 87.74 |
| PGSC0003DMT400060654 | Potato | cytosol | 83.85 | 85.49 |
| Solyc04g012120.2.1 | Tomato | extracellular, nucleus | 83.46 | 85.1 |
| PGSC0003DMT400041810 | Potato | cytosol | 84.23 | 84.88 |
| CDX73313 | Canola | cytosol | 85.77 | 84.15 |
| CDX91676 | Canola | cytosol | 83.46 | 83.78 |
| CDY41483 | Canola | cytosol | 82.69 | 83.01 |
| CDY28408 | Canola | cytosol | 83.85 | 82.89 |
| CDY51543 | Canola | cytosol | 83.08 | 82.76 |
| CDX67405 | Canola | cytosol | 81.92 | 82.56 |
| CDY71290 | Canola | cytosol | 81.54 | 82.49 |
| CDY28698 | Canola | cytosol | 82.69 | 82.38 |
| CDX74252 | Canola | cytosol | 82.69 | 82.38 |
| CDX91996 | Canola | cytosol | 82.31 | 81.99 |
| CDX74521 | Canola | cytosol | 80.77 | 81.71 |
| CDY01659 | Canola | cytosol | 80.38 | 81.32 |
| CDX87455 | Canola | cytosol | 93.46 | 81.27 |
| CDY00447 | Canola | cytosol | 80.38 | 80.38 |
| CDY46646 | Canola | cytosol | 80.0 | 80.0 |
| Solyc11g010200.1.1 | Tomato | nucleus | 80.77 | 78.07 |
| CDX85759 | Canola | cytosol | 70.77 | 74.19 |
| CDY40098 | Canola | cytosol | 70.77 | 74.19 |
| CDX81287 | Canola | cytosol | 70.38 | 73.49 |
| CDY14562 | Canola | cytosol | 70.0 | 73.39 |
| CDY54716 | Canola | cytosol | 70.0 | 73.09 |
| CDY08794 | Canola | cytosol | 69.62 | 72.98 |
| CDX78381 | Canola | cytosol | 70.0 | 72.8 |
| CDX81179 | Canola | cytosol | 70.0 | 72.8 |
| CDX97016 | Canola | cytosol | 61.54 | 70.18 |
| CDY69181 | Canola | cytosol | 63.08 | 64.82 |
| CDY38227 | Canola | cytosol | 62.69 | 64.43 |
| CDY16161 | Canola | cytosol | 66.15 | 63.94 |
| CDX85023 | Canola | cytosol | 66.15 | 63.7 |
| CDY40251 | Canola | cytosol | 58.08 | 61.63 |
| CDY61201 | Canola | cytosol | 63.46 | 60.66 |
| CDY42826 | Canola | cytosol | 62.31 | 59.78 |
| Zm00001d013429_P001 | Maize | extracellular | 26.15 | 58.62 |
| KRH05108 | Soybean | cytosol | 34.62 | 56.6 |
| CDY20560 | Canola | cytosol | 58.08 | 56.55 |
| CDY48771 | Canola | cytosol | 38.85 | 55.49 |
| CDY56386 | Canola | mitochondrion | 39.62 | 52.28 |
| CDY52206 | Canola | mitochondrion | 39.62 | 52.28 |
| CDY61631 | Canola | cytosol | 65.77 | 52.13 |
| CDY24128 | Canola | cytosol | 65.38 | 51.83 |
| CDX91673 | Canola | cytosol | 49.62 | 47.96 |
| GSMUA_Achr3P17880_001 | Banana | cytosol | 31.92 | 47.16 |
| CDX87464 | Canola | cytosol | 37.69 | 46.23 |
| CDX88428 | Canola | cytosol | 41.54 | 44.81 |
| CDX97014 | Canola | cytosol, plastid | 18.85 | 44.55 |
| CDY03135 | Canola | cytosol | 58.08 | 38.32 |
| VIT_00s0199g00140.t01 | Wine grape | cytosol | 52.69 | 23.58 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| GO:A0A078FQL8 | UniProt:A0A078FQL8 | EnsemblPlants:CDY14618 | ProteinID:CDY14618 | ProteinID:CDY14618.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | EnsemblPlantsGene:GSBRNA2T00084358001 | InterPro:IPR036815 |
| PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 |
| PANTHER:PTHR18860:SF26 | SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI0001BA8DA5 | : | : |
Description
BnaC02g24950DBnaC02g24950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQL8]
Coordinates
chrLK032045:-:347596..350234
Molecular Weight (calculated)
29286.3 Da
IEP (calculated)
4.332
GRAVY (calculated)
-0.494
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSAREEFVY MAKLAEQAER YEEMVEFMEK VSASVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVAAIRDYRG KIETELTGIC
101: EGILKLLDSR LVPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEN TLSAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDDAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEEIKEE SAPKPAEEQQ
101: EGILKLLDSR LVPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEN TLSAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDDAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEEIKEE SAPKPAEEQQ
001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
Arabidopsis Description
GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.