CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12210	Canola	plasma membrane	81.99	79.59
CDY48270	Canola	plasma membrane	81.43	78.96
CDY66699	Canola	plasma membrane	81.77	78.94
CDX84734	Canola	plasma membrane	81.66	78.83
AT2G32400.1	Thale cress	plasma membrane	80.65	78.28
VIT_12s0059g02260.t01	Wine grape	plasma membrane	53.91	53.03
KRH26791	Soybean	plasma membrane	53.24	52.37
KRH22563	Soybean	plasma membrane	52.68	51.82
Solyc07g052390.2.1	Tomato	nucleus	48.88	50.4
PGSC0003DMT400065543	Potato	plasma membrane	50.45	49.56
GSMUA_Achr5P00740_001	Banana	plasma membrane	46.87	48.78
CDY06165	Canola	plasma membrane	41.16	42.25
CDX78008	Canola	plasma membrane	41.72	41.86
CDX73718	Canola	plasma membrane	41.61	41.75
CDY35797	Canola	plasma membrane	38.37	41.73
CDY10044	Canola	plasma membrane	43.51	41.43
CDY46839	Canola	plasma membrane	43.85	41.22
CDY49512	Canola	plasma membrane	43.51	40.82
CDX69127	Canola	plasma membrane	41.16	40.35
CDX76331	Canola	plasma membrane	40.94	40.22
CDY24327	Canola	plasma membrane	40.83	40.02
CDY71348	Canola	golgi, plasma membrane	11.86	40.0
CDY52597	Canola	plasma membrane	40.6	39.8
CDY65624	Canola	plasma membrane	38.59	39.66
CDX80728	Canola	cytosol	10.63	39.26
CDX75491	Canola	cytosol, plasma membrane, plastid	8.95	39.22
CDX95758	Canola	cytosol	17.67	38.82
CDY48271	Canola	plastid	31.1	37.62
CDY66698	Canola	plasma membrane	37.25	37.46
CDY70557	Canola	extracellular, plasma membrane	21.92	36.77
CDY68928	Canola	extracellular, plasma membrane	21.92	36.77
CDX84735	Canola	plasma membrane	36.35	36.6
CDY12211	Canola	plasma membrane	35.23	35.43
CDX75490	Canola	extracellular, plasma membrane, vacuole	22.71	34.88
CDX72325	Canola	plasma membrane	22.71	30.12
CDY31759	Canola	cytosol, peroxisome, plasma membrane	15.77	29.94
CDY51113	Canola	plasma membrane	28.64	29.8
CDY54213	Canola	plasma membrane	29.08	29.25
CDX85724	Canola	plasma membrane	28.08	29.22
CDY00544	Canola	plasma membrane	25.28	29.01
CDY70035	Canola	cytosol, plasma membrane	25.84	28.55
CDY58212	Canola	cytosol, plasma membrane	26.4	28.3
CDY36173	Canola	plasma membrane	25.39	28.16
CDY56837	Canola	plasma membrane	28.75	28.0
CDY31756	Canola	cytosol, peroxisome, plastid	27.18	28.0
CDY31755	Canola	cytosol	28.41	27.52
CDX73196	Canola	cytosol, peroxisome, plasma membrane	28.08	27.49
CDY45595	Canola	plasma membrane	26.4	27.44
CDY39533	Canola	plasma membrane	28.75	26.47
CDY38574	Canola	plasma membrane	28.41	26.27
CDY50141	Canola	plasma membrane	15.55	26.23
CDY68132	Canola	plasma membrane	29.08	25.77
CDY13449	Canola	cytosol	27.63	25.76
CDY63640	Canola	cytosol	13.42	22.1
CDY72467	Canola	cytosol	0.22	2.7

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	GO:A0A078FR47	UniProt:A0A078FR47
InterPro:ANF_lig-bd_rcpt	EnsemblPlants:CDY15337	ProteinID:CDY15337	ProteinID:CDY15337.1	GO:GO:0003674	GO:GO:0004871
GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235
GO:GO:0038023	EnsemblPlantsGene:GSBRNA2T00085619001	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	PFAM:PF00060	PFAM:PF00497
PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR01176	PANTHER:PTHR43891	PANTHER:PTHR43891:SF15	InterPro:Peripla_BP_I
SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix
UniParc:UPI0004EF0635	:	:	:	:	:

Description

BnaC04g42860DGlutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A078FR47]

Coordinates

chrLK032054:+:113935..119667

Molecular Weight (calculated)

100453.0 Da

IEP (calculated)

8.149

GRAVY (calculated)

0.033

Length

894 amino acids

Sequence
(BLAST)

001: MGLRIDKSVA ITVLIVATLM VQVRCQRPKV INLGAVFTFD SVIGRAAKVA LEAAVSDVNA DTSLLQETEL RLFVEDSSCN VFHGSFAAFE VLGKEVVAII
101: GPISSSIAHT LSDIAKGLKF PLVSFAATDP TLSALQFPFF LRTTPDDAHQ MSALVELIDF HGWKEVISVY SDDELGRNGV SALDDELDKK RFRISYKVPL
201: SLHADENSVT DALNRSKSLG PRVYILHFGP DPLLRIFTIA QKLKMMTREY VWLATDWLSV TLDSSLSGED TFKRLEGVVG LRQYIPESIK MRQLKRNRSM
301: NAYAFHAYDT VWMIAYGIEK MLNEGVKITF SHSKKLTHAQ GHKLHLEKVK IFNRGEVLLE KLLKVNFTGL AGQVRFGSSG RNVTGCDYEI INVDRTGVHT
401: VGFWSKNGGF SVGNITWPGG GSEKPRGWVI DSENPLKIVV PKRVSFVEFV TEDRNTSTHH IKGLCIDIFI EALKLLPYNV PYKFESFGDG HSSPNYSKII
501: QMVSDGVYDA AVGDITIVPT RSKLVDFSQP YASTGLVVVI PNVYDGTWIF LRPFTTQLWC VVLASFLCIG VVIWILEHRV NEDFRGPPRR QIITMIFFSF
601: STLFKRNHED TISNLARLVM IFWLFLLMVL IASYKAEVSS ILTVQQLPSA ITGIDSLRAS ELPIGYQSGT FTFEYLTYSL GMARSRLVPL DSIEEYERAL
701: KLGPNALGGV AAIVDELPYI ELFLAERTGF KIVGEPFMNR GWGFAFKRDS PLAIDMSTAI LNLTETRKQK RILKKWLCKK SCGEKSDWNQ PEPNQFHLKS
801: FEGLYLFCVA ITVSAFLVFV LRMIRQFVRY RRSERISLTP RASLSSSPTT TRLWGFMLGF VEFVDEKEEA TRSDDDSNNN PSQVVELQGD SEVR

Best Arabidopsis Sequence Match ( AT2G32400.1 )
(BLAST)

001: MGLGIDPSVA ITALIVVILV VPMDCQRPQL VNIGAVFAFD SVIGRAAKVA LEAAVSDVNN DKSFLKETEL RLLMEDSACN VFRGSFGAFE LLEKEVVAMI
101: GPISSSVAHT ISDIAKGLHF PLVSFAATDP TLSALQFPFF LRTTPNDAHQ MSALVDLINF YGWKEVISVY SDDELGRNGV SALDDELYKK RSRISYKVPL
201: SVHSDEKFLT NALNKSKSIG PRVYILHFGP DPLLRIFDIA QKLQMMTHEY VWLATDWLSV TLDSLSDKGT LKRLEGVVGL RQHIPESVKM EHFTHKLQSN
301: RSMNAYALHA YDTVWMIAHG IEELLNEGIN ITFSYSEKLL HARGTKLHLE KIKFFNSGEL LLEKLLKVNF TGIAGQVQFG SGRNVIGCDY EIINVNKTDV
401: HTVGFWSKNG GFSVVAPKTR HSQKKTSFVS DEKLGDITWP GGGREKPRGW VIADSADPLK IVVPRRVSFV EFVTEEKNSS HRIQGFCIDV FIEALKFVPY
501: SVPYIFEPFG NGHSSPNYNH LIQMVTDGVY DAAVGDIAIV PSRSKLVDFS QPYASTGLVV VIPANDDNAT WIFLRPFTSR LWCVVLVSFL VIAVVIWILE
601: HRINEDFRGP PRRQLSTMLL FSFSTLFKRN QEDTISNLAR LVMIVWLFLL MVLTASYTAN LTSILTVQQL PSAITGIDSL RASEVPIGYQ AGTFTLEYLT
701: YSLGMARSRL VPLDSTEEYE KALKLGPTNW GGVAAIVDEL PYIELFLAER TGFKIVGEPF MHRGWGFAFK RDSPLAIDMS TAILKLSETR KLQEIRKKWL
801: CKTNCAGKSN WNPEPNQLHL KSFKGLYLVC IAITVSAFLV FVLRMIRQFV RYRRMERTSS MPRASWSASP TLRLRELVFD FVEFVDEKEE AIKRMFRRSD
901: DSNNNPSHVG EVQADTEVPR N

Arabidopsis Description

GLR3.7Glutamate receptor 3.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDQ4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.