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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24327 Canola plasma membrane 98.25 98.25
AT2G17260.1 Thale cress plasma membrane 88.49 87.24
CDX69127 Canola plasma membrane 78.07 78.07
CDY65624 Canola plasma membrane 73.79 77.36
CDX76331 Canola plasma membrane 76.1 76.26
CDY71348 Canola golgi, plasma membrane 21.82 75.09
CDX75491 Canola cytosol, plasma membrane, plastid 16.56 74.02
CDX75490 Canola extracellular, plasma membrane, vacuole 45.94 71.99
VIT_03s0038g03920.t01 Wine grape plasma membrane 60.96 60.63
KRH14012 Soybean plasma membrane 60.64 60.44
GSMUA_Achr9P23900_001 Banana plasma membrane 55.7 55.34
GSMUA_Achr3P27050_001 Banana plasma membrane 55.37 55.19
CDY35797 Canola plasma membrane 49.12 54.5
GSMUA_Achr5P19180_001 Banana plasma membrane 52.3 53.0
CDX95758 Canola cytosol 23.25 52.09
KRH74102 Soybean cytosol, nucleus, peroxisome 37.06 52.08
CDX78008 Canola plasma membrane 50.88 52.08
CDY06165 Canola plasma membrane 49.23 51.55
CDX73718 Canola plasma membrane 50.33 51.52
Zm00001d015007_P003 Maize plasma membrane 50.33 50.94
TraesCS2A01G455200.2 Wheat plasma membrane 51.21 50.82
TraesCS2B01G477300.4 Wheat plasma membrane 51.1 50.71
HORVU0Hr1G018770.1 Barley plasma membrane 44.41 50.44
TraesCS2D01G455600.2 Wheat plasma membrane 50.77 50.38
Os02t0117500-01 Rice plasma membrane 51.75 50.0
Zm00001d002532_P003 Maize plasma membrane 50.99 49.95
TraesCS6A01G049900.1 Wheat plasma membrane 50.44 49.84
TraesCS6B01G066200.1 Wheat plasma membrane 50.33 49.84
TraesCSU01G108800.1 Wheat plasma membrane 50.33 49.73
CDY10044 Canola plasma membrane 50.99 49.52
HORVU2Hr1G104920.3 Barley plasma membrane 51.54 49.47
TraesCS6A01G048700.1 Wheat plasma membrane 50.22 49.46
TraesCSU01G107900.1 Wheat plasma membrane 50.22 49.46
TraesCSU01G107700.2 Wheat plasma membrane 50.11 49.35
KXG29299 Sorghum plasma membrane 50.11 49.35
TraesCS6A01G048800.1 Wheat plasma membrane 50.11 49.35
KXG26996 Sorghum plasma membrane 50.55 49.3
TraesCS6B01G065400.1 Wheat plasma membrane 50.0 49.24
TraesCS6B01G065700.1 Wheat plasma membrane 49.78 49.19
HORVU6Hr1G009520.1 Barley plasma membrane 49.89 49.14
HORVU2Hr1G049510.4 Barley plasma membrane 50.11 48.98
HORVU0Hr1G036590.3 Barley plasma membrane 50.11 48.98
TraesCS6B01G065500.1 Wheat plasma membrane 49.67 48.92
TraesCSU01G108000.1 Wheat plasma membrane 49.56 48.92
OQU84212 Sorghum mitochondrion 48.68 48.84
TraesCS6A01G049000.1 Wheat plasma membrane 49.67 48.66
CDY49512 Canola plasma membrane 50.77 48.58
CDY46839 Canola plasma membrane 50.55 48.48
CDY68928 Canola extracellular, plasma membrane 28.29 48.41
CDX80728 Canola cytosol 12.83 48.35
CDY70557 Canola extracellular, plasma membrane 28.18 48.22
Zm00001d054016_P004 Maize plasma membrane 49.89 47.84
Zm00001d033769_P001 Maize golgi, plasma membrane 31.69 45.8
Os04t0585200-02 Rice extracellular 26.97 45.56
CDY66698 Canola plasma membrane 42.65 43.76
CDX84735 Canola plasma membrane 41.89 43.02
CDY48271 Canola plastid 33.55 41.41
PGSC0003DMT400038012 Potato plasma membrane 55.59 41.29
CDY48270 Canola plasma membrane 41.45 41.0
CDY66699 Canola plasma membrane 41.56 40.93
CDX84734 Canola plasma membrane 41.56 40.93
CDY12210 Canola plasma membrane 41.12 40.72
CDY15337 Canola plasma membrane 39.8 40.6
CDY12211 Canola plasma membrane 38.71 39.71
CDY70035 Canola cytosol, plasma membrane 28.4 32.01
CDY31759 Canola cytosol, peroxisome, plasma membrane 16.34 31.63
CDY31756 Canola cytosol, peroxisome, plastid 29.93 31.45
CDY58212 Canola cytosol, plasma membrane 27.85 30.46
CDY31755 Canola cytosol 30.81 30.44
CDY54213 Canola plasma membrane 29.5 30.26
CDY39533 Canola plasma membrane 31.8 29.87
CDX72325 Canola plasma membrane 22.04 29.82
CDY38574 Canola plasma membrane 31.25 29.47
CDY50141 Canola plasma membrane 17.0 29.25
CDY56837 Canola plasma membrane 28.73 28.54
CDY36173 Canola plasma membrane 25.22 28.54
CDY00544 Canola plasma membrane 24.34 28.5
CDY51113 Canola plasma membrane 26.75 28.41
CDX73196 Canola cytosol, peroxisome, plasma membrane 28.4 28.37
CDX85724 Canola plasma membrane 26.64 28.29
CDY45595 Canola plasma membrane 26.64 28.26
CDY68132 Canola plasma membrane 29.5 26.66
CDY13449 Canola cytosol 26.1 24.82
CDY63640 Canola cytosol 13.93 23.39
CDY72467 Canola cytosol 0.11 1.35
Os02t0117600-01 Rice plastid 0.0 0.0
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078IRJ8UniProt:A0A078IRJ8
InterPro:ANF_lig-bd_rcptEnsemblPlants:CDY52597ProteinID:CDY52597ProteinID:CDY52597.1ncoils:CoilGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0035235GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00007373001InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060
PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PANTHER:PTHR43891PANTHER:PTHR43891:SF18InterPro:Peripla_BP_I
SMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelix
UniParc:UPI0004EE20F0SEG:seg::::
Description
BnaCnng22760DGlutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A078IRJ8]
Coordinates
chrLK033107:+:16520..20289
Molecular Weight (calculated)
101549.0 Da
IEP (calculated)
7.624
GRAVY (calculated)
0.005
Length
912 amino acids
Sequence
(BLAST)
001: MNCVLLGFIV LGAFLGLLSE GASTSRPRVI KVGAIFGLNT MYGQTASLAF KAAEEDVNSD LSFLGGSKLR IMIIDAQRSG FLSIMGALQF METDVVAIIG
101: PQTSIMAHVL SHLANELTVP MLSFTALDPT LSPLQFPFFV QTAPNDLFLM RAIAEMITYY GWSDVVALYN DDDNSRNGVT ALGDELEERR CKISYKAVLP
201: LDVVITSPAE IIEELTKIRG MESRIIVVNT FPNTGKMIFE EAERLGMMEK GYVWIATTWL SSLVDSDLPL DLKSLNGVLT LRLHTPDSRK KRDFAARWKK
301: NKTIGLNVYG LYAYDTVWII AQAVKSFLEA GGNLTFSHDA KLSNLKGEAL NLSALSRFDE GPQLLDYIMR TKMSGLTGPV QFHRDRSMAQ PSYDIINVVD
401: GGFRQIGYWS NHSGLSTVPP ESFYNKPSNR SSSNQHLNSV TWPGGTSVTP RGWVFPNNGK LLRIGVPNRA SFKDFVSRVN GSSNHKVQGY CIDVFEAAVK
501: LLSYPVPHEF IFFGDGLQNP NYNDLVNKVA IGVGFDAAVG DIAIVTKRTR IVDYTQPYIE SGLVVVAPVT ALNENPWAFL RPFTPPMWAV TASFFMVVGA
601: VIWILEHRTN DEFRGPPRRQ IITILWFTFS TMFFSHRENT TSTLGRMVLL IWLFVVLIIT SSYTASLTSM LTVQQLNSPI KGVDTLISSS GRIGFQVGSF
701: AENYMIDELN IARSRLVALG SPQEYATALQ NGTVSAIVDE RPYVDLFLSD YCKFAIRGQE FTRCGWGFAF PRDSPLAVDM STAILGLSET GELQRIHDRW
801: LSKSNCSSPH GSQSGDSEQL NVHSFWGMFL VCGIACLVAL FIHFVKVVRN FLKHKPEEEE KDIPSPESSR LKKLQTFLAY IDEKEEESKR RFKRKRSSLS
901: MNANSSISSR QI
Best Arabidopsis Sequence Match ( AT2G17260.1 )
(BLAST)
001: MLSSMNWVLL SFIIVLGGGL LLSEGASSSR PPVIKVGAIF GLNTMYGETA NIAFKAAEED VNSDPSFLGG SKLRILMNDA KRSGFLSIMG ALQFMETDVV
101: AIIGPQTSIM AHVLSHLANE LTVPMLSFTA LDPTLSPLQF PFFVQTAPSD LFLMRAIAEM ITYYGWSDVV ALYNDDDNSR NGVTALGDEL EERRCKISYK
201: AVLPLDVVIT SPVEIIEELI KIRGMESRVI VVNTFPNTGK MIFKEAERLG MMEKGYVWIA TTWLSSVLDS NLPLDTKLVN GVLTLRLHTP DSRKKRDFAA
301: RWKNKLSNNK TIGLNVYGLY AYDTVWIIAR AVKTLLEAGG NLSFSNDAKL GSLKGEALNL SALSRFDQGS QLLDYIVHTK MSGLTGPVQF HPDRSMLQPS
401: YDIINLVDDR VHQIGYWSNY SGLSIVPPES FYSKPPNRSS SNQHLNSVTW PGGTSVTPRG WIFRNNGRRL RIGVPDRASF KDFVSRVNGS SNKVQGYCID
501: VFEAAVKLLS YPVPHEFIFF GDGLTNPNYN ELVNKVTTGV DFDAVVGDIA IVTKRTRIVD FTQPYIESGL VVVAPVTRLN ENPWAFLRPF TLPMWAVTAS
601: FFVIVGAAIW ILEHRINDEF RGPPRRQIIT ILWFTFSTMF FSHRETTVST LGRMVLLIWL FVVLIITSSY TASLTSILTV QQLNSPIKGV DTLISSTGRI
701: GFQVGSFAEN YMTDELNIAS SRLVPLASPE EYANALQNGT VAAIVDERPY IDLFLSDYCK FAIRGQEFTR CGWGFAFPRD SPLAVDMSTA ILGLSETGEL
801: QKIHDRWLSK SNCSSPHGSQ SGDSEQLNVH SFWGMFLVVG IACLVALFIH FFKIIRDFCK DTPEVVVEEA IPSPKSSRLT KLQTFLAFVD EKEEETKRRL
901: KRKRNNDHSM NANSIISRTA SRRPI
Arabidopsis Description
GLR2glutamate receptor 2 [Source:TAIR;Acc:AT2G17260]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.