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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d015007_P003 Maize plasma membrane 89.63 92.12
Zm00001d054016_P004 Maize plasma membrane 93.2 90.75
Zm00001d033769_P001 Maize golgi, plasma membrane 61.66 90.49
OQU84212 Sorghum mitochondrion 82.29 83.83
TraesCSU01G108800.1 Wheat plasma membrane 81.43 81.69
TraesCS6B01G066200.1 Wheat plasma membrane 80.99 81.43
TraesCS6A01G048800.1 Wheat plasma membrane 80.89 80.89
TraesCS6B01G065500.1 Wheat plasma membrane 80.78 80.78
TraesCSU01G107900.1 Wheat plasma membrane 80.67 80.67
TraesCS6A01G049900.1 Wheat plasma membrane 80.35 80.61
TraesCS6B01G065700.1 Wheat plasma membrane 80.13 80.39
TraesCSU01G108000.1 Wheat plasma membrane 79.7 79.87
TraesCS6A01G048700.1 Wheat plasma membrane 79.81 79.81
HORVU0Hr1G036590.3 Barley plasma membrane 80.35 79.74
HORVU2Hr1G049510.4 Barley plasma membrane 80.35 79.74
Os02t0117500-01 Rice plasma membrane 81.21 79.66
TraesCS6A01G049000.1 Wheat plasma membrane 79.91 79.48
TraesCSU01G107700.2 Wheat plasma membrane 79.37 79.37
TraesCS6B01G065400.1 Wheat plasma membrane 79.37 79.37
HORVU6Hr1G009520.1 Barley plasma membrane 79.27 79.27
HORVU0Hr1G018770.1 Barley plasma membrane 68.68 79.2
GSMUA_Achr3P27050_001 Banana plasma membrane 60.15 60.87
GSMUA_Achr9P23900_001 Banana plasma membrane 59.94 60.46
KXG26996 Sorghum plasma membrane 56.8 56.26
KRH60898 Soybean plasma membrane 54.75 54.81
VIT_07s0031g02170.t01 Wine grape plasma membrane 55.4 54.81
KRH51581 Soybean plasma membrane 54.97 54.79
VIT_18s0122g00990.t01 Wine grape plasma membrane 55.08 54.6
Solyc04g082610.2.1 Tomato plasma membrane 54.43 54.31
CDY35797 Canola plasma membrane 48.06 54.14
VIT_03s0038g03920.t01 Wine grape plasma membrane 52.92 53.44
CDY71348 Canola golgi, plasma membrane 15.23 53.21
PGSC0003DMT400025675 Potato plasma membrane 53.46 53.17
Bra034931.1-P Field mustard plasma membrane 53.02 52.85
AT1G42540.2 Thale cress plasma membrane 52.92 52.52
KRH39417 Soybean golgi, plasma membrane, plastid 52.7 52.47
KRH39414 Soybean plasma membrane 52.7 51.8
KRH07800 Soybean plasma membrane 51.08 51.64
AT4G35290.2 Thale cress plasma membrane 50.76 51.54
KRH14012 Soybean plasma membrane 50.65 51.26
CDX76331 Canola plasma membrane 50.32 51.21
Bra011603.1-P Field mustard plasma membrane 50.22 50.93
CDX69127 Canola plasma membrane 50.11 50.88
CDY65624 Canola plasma membrane 47.62 50.69
CDY70557 Canola extracellular, plasma membrane 29.16 50.66
CDY68928 Canola extracellular, plasma membrane 29.05 50.47
EER97313 Sorghum plasma membrane 50.32 50.43
CDX73718 Canola plasma membrane 48.49 50.39
KRH39412 Soybean plasma membrane 51.3 50.16
CDY52597 Canola plasma membrane 49.35 50.11
Solyc02g082480.2.1 Tomato plasma membrane 51.73 50.0
KRH76527 Soybean plasma membrane 50.54 49.89
CDY24327 Canola plasma membrane 49.14 49.89
KRH28939 Soybean plasma membrane 50.43 49.79
CDX78008 Canola plasma membrane 47.84 49.72
Bra036795.1-P Field mustard plasma membrane 47.84 49.72
AT2G17260.1 Thale cress plasma membrane 49.46 49.51
EER90229 Sorghum plasma membrane 49.14 49.14
AT3G51480.1 Thale cress plasma membrane 47.62 48.84
EER95720 Sorghum plastid 50.97 48.51
KXG20638 Sorghum plasma membrane 50.0 48.23
CDX75491 Canola cytosol, plasma membrane, plastid 10.58 48.04
CDX80728 Canola cytosol 12.53 47.93
CDX95758 Canola cytosol 20.95 47.67
KXG20640 Sorghum plasma membrane 47.19 46.99
EER95721 Sorghum plastid 47.19 44.55
CDX75490 Canola extracellular, plasma membrane, vacuole 27.86 44.33
KRH74102 Soybean cytosol, nucleus, peroxisome 30.24 43.14
Bra020812.1-P Field mustard plasma membrane 42.55 38.86
PGSC0003DMT400038012 Potato plasma membrane 48.49 36.56
KXG19504 Sorghum golgi, plasma membrane, vacuole 30.56 32.49
KXG31244 Sorghum mitochondrion 32.29 29.55
OQU89536 Sorghum cytosol 28.51 29.2
KXG35672 Sorghum mitochondrion, plasma membrane 30.56 29.18
OQU89534 Sorghum plasma membrane 28.51 28.98
EER98937 Sorghum plasma membrane 29.37 28.78
KXG35671 Sorghum plasma membrane 30.45 28.78
OQU84757 Sorghum plasma membrane 28.29 28.76
OQU89527 Sorghum plasma membrane 28.08 27.96
EER98936 Sorghum plasma membrane 28.08 27.48
KXG35670 Sorghum plasma membrane 27.86 26.41
Os02t0117600-01 Rice plastid 0.32 1.24
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A194YN90InterPro:ANF_lig-bd_rcpt
GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnEnsemblPlants:KXG29299
ProteinID:KXG29299ProteinID:KXG29299.1PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090
PANTHER:PTHR43891PANTHER:PTHR43891:SF4InterPro:Peripla_BP_ISMART:SM00079EnsemblPlantsGene:SORBI_3004G013300SUPFAM:SSF53822
SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0007F1E978SEG:seg
Description
hypothetical protein
Coordinates
chr4:+:1099393..1104051
Molecular Weight (calculated)
102846.0 Da
IEP (calculated)
6.361
GRAVY (calculated)
0.040
Length
926 amino acids
Sequence
(BLAST)
001: MNIAFLMLLV LSLFHFPNGI HKSLAARPSV VSIGSILRLN STTGGVSDVA IHAAVDDINS DPTVLNGTTL RVDTKDTNCD DGFLGMVQAL QFMETDVIAI
101: IGPQCSPIAH IISYVANELR VPLMSFASDA TLSSIQFPFF MRTMPSDLYQ MAAVAAVVDY YQWKIVTAIY VDDDYGRNGI AALDDELTAR RCKISYKVGF
201: RSNAKKSELL NLLVTVSNME SRVIILHTGS EPGLKLLSIA NGLNMMGNGY VWIATDWLSA YLDANSSVPA ETINGMQGVL TVRPHTPKSK MKSNLVSRWS
301: SLSKKYNHSD LRISAYGFYV YDSVWTVARA LDAFFDDGGR ISFTNDSRLR DETGGTLHLE AMSIFDMGNK LLEKVRNVNF TGVSGQVQFN AQFELIHPAY
401: DVISIIGNGM RTIGFWSNYT RLLSTVLPED LYSKPPNTSL ANQQLYDVIW PGETAQKPRG WAFPSNAKEL KIGVPNRFSF KEFVSQDNAT GSMMGYCIDV
501: FTQALSLLPY PVTYRFIPFG NGTKNPHYDE LVQMVVDNDF DAAVGDIVIT MSRTKTVDFT QPFIESGLVI LAPIKKHITS SWAFLQPFTL GMWCVTGLSF
601: LVVGAVIWIL EHRINDEFRG SPRQQIITIV WFSFSTLFFA HRENTMSTLG RGVLIIWLFV VLIIQSSYTA SLTSILTVQQ LDTSIRGIDD LKESDYPIGF
701: QVGSFAEDYM VKELNISRSR LKALGSPEEY AENLKLGPKK GGVMAIVDER PYVELFLSTY CKIAVAGSDF TSTGWGFAFP RDSPLQVDLS TAILTLSENG
801: ELQRIHDKWL KTADCSIDNT EFVDSNQLRL ESFMGLFLIC GAACVLALLI YFGITLRQYL RHEQPGSAIS VDAGSSTSKR SLRKFISFVD DRQPPPKKKR
901: TMSLSRSSMP TTPMSNRPGT DIDIES
Best Arabidopsis Sequence Match ( AT1G42540.2 )
(BLAST)
001: MKQLWTFFFL SFLCSGLFRR THSEKPKVVK IGSIFSFDSV IGKVAKIAID EAVKDVNSNP DILSGTKFSV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP
101: QCSVVAHMIS HMANELRVPL LSFAVTDPVM SPLQFPYFIR TTQSDLYQMD AIASIVDFYG WKEVIAVFVD DDFGRNGVAA LNDKLASRRL RITYKAGLHP
201: DTAVNKNEIM NMLIKIMLLQ PRIVVIHVYS ELGFAVFKEA KYLGMMGNGY VWIATDWLST NLDSSSPLPA ERLETIQGVL VLRPHTPDSD FKREFFKRWR
301: KMSGASLALN TYGLYAYDSV MLLARGLDKF FKDGGNISFS NHSMLNTLGK SGNLNLEAMT VFDGGEALLK DILGTRMVGL TGQLQFTPDR SRTRPAYDII
401: NVAGTGVRQI GYWSNHSGLS TVLPELLYTK EKPNMSTSPK LKHVIWPGET FTKPRGWVFS NNGKELKIGV PLRVSYKEFV SQIRGTENMF KGFCIDVFTA
501: AVNLLPYAVP VKFIPYGNGK ENPSYTHMVE MITTGNFDGV VGDVAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTGCCFLFV
601: GIVVWILEHR TNDEFRGPPK RQCVTILWFS FSTMFFAHRE NTVSTLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLSS PIKGIESLRE RDDPIGYQVG
701: SFAESYLRNE LNISESRLVP LGTPEAYAKA LKDGPSKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS PLAIDLSTAI LELAENGDLQ
801: RIHDKWLMKN ACTLENAELE SDRLHLKSFW GLFLICGVAC LLALFLYFVQ IIRQLYKKPT DDAIARDQQQ NHDSSSMRST RLQRFLSLMD EKEESKHESK
901: KRKIDGSMND TSGSTRSRGF DRERSFNSVN PLD
Arabidopsis Description
GLR3.3Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.