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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU89527 Sorghum plasma membrane 76.84 75.27
Os09t0428300-00 Rice plasma membrane 68.5 71.56
Os09t0428600-00 Rice plasma membrane 36.44 61.37
EER98937 Sorghum plasma membrane 61.8 59.58
EER98936 Sorghum plasma membrane 55.87 53.81
OQU89534 Sorghum plasma membrane 51.92 51.92
OQU89536 Sorghum cytosol 50.71 51.11
Os09t0429000-00 Rice plasma membrane 52.03 50.8
GSMUA_Achr3P04970_001 Banana plasma membrane 51.04 48.59
VIT_04s0069g00200.t01 Wine grape cytosol 22.94 47.39
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 27.66 45.41
GSMUA_Achr9P13570_001 Banana plasma membrane 44.35 44.3
VIT_04s0069g00380.t01 Wine grape cytosol 19.65 43.66
VIT_04s0069g00560.t01 Wine grape plasma membrane 42.48 43.19
VIT_04s0069g00720.t01 Wine grape cytosol 27.88 42.55
VIT_04s0069g00170.t01 Wine grape plasma membrane 42.81 42.12
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 37.54 41.3
VIT_04s0069g00670.t01 Wine grape plasma membrane 41.49 41.13
VIT_04s0069g00620.t01 Wine grape plasma membrane 44.46 40.91
Solyc08g006500.2.1 Tomato extracellular 43.58 40.89
VIT_04s0069g00540.t01 Wine grape plasma membrane 31.61 40.74
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 37.98 39.95
Bra040760.1-P Field mustard cytosol 36.33 39.31
AT2G29110.2 Thale cress plasma membrane 40.61 39.03
AT2G29100.2 Thale cress plasma membrane 40.29 38.96
KRH50533 Soybean plasma membrane 34.25 38.9
VIT_04s0069g00060.t01 Wine grape plasma membrane 41.71 38.82
AT2G29120.1 Thale cress plasma membrane 40.4 38.66
Bra032072.1-P Field mustard plasma membrane 37.76 38.39
KRH50532 Soybean plasma membrane 33.92 38.24
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 39.08 38.12
CDY51113 Canola plasma membrane 35.89 38.07
Bra023313.1-P Field mustard plasma membrane 35.68 37.83
CDY31756 Canola cytosol, peroxisome, plastid 36.0 37.79
AT5G27100.1 Thale cress plasma membrane 37.1 37.51
CDX85724 Canola plasma membrane 35.35 37.49
CDY00544 Canola plasma membrane 32.05 37.48
CDY70035 Canola cytosol, plasma membrane 33.26 37.45
VIT_04s0069g00230.t01 Wine grape plasma membrane 42.04 37.44
CDY31755 Canola cytosol 37.87 37.38
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 24.26 37.27
Bra040761.1-P Field mustard cytosol 37.76 36.95
CDY38574 Canola plasma membrane 38.97 36.71
AT2G24720.1 Thale cress plasma membrane 36.99 36.63
CDY58212 Canola cytosol, plasma membrane 33.26 36.33
AT5G11210.5 Thale cress plasma membrane 36.55 36.27
PGSC0003DMT400023744 Potato cytosol 34.69 36.16
CDY54213 Canola plasma membrane 35.24 36.11
CDY39533 Canola plasma membrane 38.42 36.05
CDY31759 Canola cytosol, peroxisome, plasma membrane 18.55 35.88
Bra032063.1-P Field mustard plasma membrane 36.22 35.75
CDX73196 Canola cytosol, peroxisome, plasma membrane 35.68 35.6
KXG35670 Sorghum plasma membrane 37.87 35.31
KXG19504 Sorghum golgi, plasma membrane, vacuole 33.7 35.25
AT2G24710.3 Thale cress plasma membrane 35.46 35.15
AT5G11180.2 Thale cress plasma membrane 37.21 35.06
CDY50141 Canola plasma membrane 20.31 34.91
CDY45595 Canola plasma membrane 32.93 34.88
KXG31244 Sorghum mitochondrion 38.75 34.88
CDY56837 Canola plasma membrane 35.13 34.86
AT4G31710.2 Thale cress plasma membrane 34.8 34.76
KXG35672 Sorghum mitochondrion, plasma membrane 36.99 34.74
CDY36173 Canola plasma membrane 30.74 34.74
CDX72325 Canola plasma membrane 25.14 33.98
CDY68132 Canola plasma membrane 37.21 33.6
Bra015817.1-P Field mustard plasma membrane 37.21 33.6
KXG35671 Sorghum plasma membrane 36.11 33.57
CDY13449 Canola cytosol 33.81 32.12
Bra023989.1-P Field mustard cytosol 34.47 31.88
CDY63640 Canola cytosol 18.55 31.12
EER90229 Sorghum plasma membrane 31.5 30.99
KXG20640 Sorghum plasma membrane 31.17 30.54
EER97313 Sorghum plasma membrane 30.95 30.52
KXG20638 Sorghum plasma membrane 31.83 30.21
EER95720 Sorghum plastid 31.61 29.6
KXG26996 Sorghum plasma membrane 29.86 29.09
OQU84212 Sorghum mitochondrion 28.32 28.38
KXG29299 Sorghum plasma membrane 28.76 28.29
EER95721 Sorghum plastid 29.64 27.52
VIT_04s0069g00330.t01 Wine grape plastid 42.26 21.88
Os09t0428750-01 Rice mitochondrion 0.55 4.13
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A1Z5RM53InterPro:ANF_lig-bd_rcpt
GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnEnsemblPlants:OQU84757
ProteinID:OQU84757ProteinID:OQU84757.1PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090
PANTHER:PTHR43891PANTHER:PTHR43891:SF11InterPro:Peripla_BP_ISMART:SM00079EnsemblPlantsGene:SORBI_3004G118000SUPFAM:SSF53822
SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI000B8B9EC6SEG:seg
Description
hypothetical protein
Coordinates
chr4:-:12436728..12441348
Molecular Weight (calculated)
100559.0 Da
IEP (calculated)
7.097
GRAVY (calculated)
-0.027
Length
911 amino acids
Sequence
(BLAST)
001: MATGVRITML ILLAFSAAVA QNATESKVEE FHIGVVLDLG TTVGKVAHTS ISIAVEDFYT VHPNHTTRLV LHVRDSKSDD VQAASAVLEL LENYNVQAII
101: GPQKSSQAVF VSALGNRYQV PIISFTATST SLSSQSLPYF VQATACDSAQ VSSIASIIKA YGWRKVVPIY VDNDYGRGIL PDLFNVLEGI DAHIPYRSAI
201: DESATGEQIT QELYKLMTMQ TRVFVVHMAS SLGSLFFTKA KEIGMMRKGF VWIITDGLAN LIDSLNPSVV EAMNGALGTD NFTMRWYMRS RNDHPNDPTL
301: KLSVFGLWSY DTIWAVAQAA EKAKVTEEKS QRPSALKNST SLGTLENSRK SLAFLQAILQ TKFKGLSGYF DLSDGELQVS MFQIINVVGK AHRVIGYCTT
401: QNGISQLSDQ RITNTTYSST TYNLNTVIWP GESTEVPRGW EIPIDGKKLQ VGIVIGGGFP KYIDASEDSL RGLVKASGLA IEIFEEAVKR LPYALPYEYV
501: VFNTTGNVSS SYDDFVYQVY LKKYDIAVGD ITIRYNRSLY VDFTLPYTES GIAMVVPVKE SINKNAWIFL KPLTPGMWFG TIILFIYTGI VIWLLEHLGD
601: NKNVRGPIPR QLATMIYFSL FEEKEKVKRL ISRIVLVIWL FFLMVLKSSY TASLTSMLTV QQLQPTVTNV DELLKTGESV GYSRGSYIKG LLEELGFDAS
701: KIKPYETPED YHNALSKGSK NGGIAAHVDE IPYIKLFLAE HCKGYTMVGP IYKTAGFGYA FQKGSPLIGD ISQAILNITG GDTIIQIEKK WIGDQNNCQN
801: VGTISGTGSL TFDSFAGPII ATGVASTTSL VVALITHFCK NKKVGPENGE SEQILPQEET KDGANEKSRC QEEDRGRGMH EQLKTVMRHG SLVIYRGERI
901: PSSRISSSAR F
Best Arabidopsis Sequence Match ( AT2G29120.1 )
(BLAST)
001: MKVMNPRKTN NTFMYYFVLF VCGFVLMEGC LGQNQTTEIK VGVVLDLHTS FSKLCLTSIN ISLSDFYKYH SDYTTRLAIH IRDSMEDVVQ ASSAALDLIK
101: NEQVSAIIGP RTSMQAEFMI RLADKSQVPT ITFSATCPLL TSINSPYFVR ATLDDSSQVK AIAAIVKSFG WRNVVAIYVD NEFGEGILPL LTDALQDVQA
201: FVVNRCLIPQ EANDDQILKE LYKLMTMQTR VFVVHMPPTL GFRFFQKARE IGMMEEGYVW LLTDGVMNLL KSNERGSSLE NMQGVLGVRS HIPKSKKLKN
301: FRLRWEKMFP KKGNDEEMNI FALRAYDSIT ALAMAVEKTN IKSLRYDHPI ASGNNKTNLG TLGVSRYGPS LLKALSNVRF NGLAGEFELI NGQLESSVFD
401: VINIIGSEER IIGLWRPSNG IVNAKSKNTT SVLGERLGPV IWPGKSKDVP KGWQIPTNGK MLRVGIPVKK GFLEFVDAKI DPISNAMTPT GYCIEIFEAV
501: LKKLPYSVIP KYIAFLSPDE NYDEMVYQVY TGAYDAVVGD VTIVANRSLY VDFTLPYTES GVSMMVPLKD NKNTWVFLRP WSLDLWVTTA CFFVFIGFIV
601: WILEHRVNTD FRGPPHHQIG TSFWFAFSTM NFAHREKVVS NLARFVVLVW CFVVLVLIQS YTANLTSFFT VKLLQPTVTN WKDLIKFNKN IGYQRGTFVR
701: ELLKSQGFDE SQLKPFGSAV ECDELFSNGT ITASFDEVAY IKVILSQNSS KYTMVEPSFK TAGFGFVFPK KSPLTDDVSR AILNVTQGEE MQHIENKWFK
801: KPNNCPDLNT SLSSNHLSLS SFWGLFLIAG IASFLALLIF VANFLYEHKH TLFDDSENSF RGKLKFLVRN FDEKDIKSHM FKENAVHNVS SPITQGSSSP
901: LTDQSTPLPR SPEQYRELEL RRVSSISSGE LFTTQSEQVE DEESAIIQCE GE
Arabidopsis Description
GLR2.7Glutamate receptor 2.7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGN0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.