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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_04s0069g00380.t01 Wine grape cytosol 19.86 47.32
VIT_04s0069g00200.t01 Wine grape cytosol 20.98 46.49
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 26.3 46.31
GSMUA_Achr7P16350_001 Banana cytosol, peroxisome, plasma membrane 34.39 46.09
VIT_04s0069g00560.t01 Wine grape plasma membrane 39.2 42.75
VIT_04s0069g00170.t01 Wine grape plasma membrane 40.33 42.55
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 35.82 42.27
VIT_04s0069g00720.t01 Wine grape cytosol 25.59 41.88
VIT_04s0069g00670.t01 Wine grape plasma membrane 39.1 41.57
VIT_04s0069g00540.t01 Wine grape plasma membrane 29.79 41.16
VIT_04s0069g00620.t01 Wine grape plasma membrane 41.45 40.91
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 36.23 40.88
VIT_04s0069g00060.t01 Wine grape plasma membrane 40.33 40.25
Solyc08g006500.2.1 Tomato extracellular 39.1 39.34
VIT_04s0069g00230.t01 Wine grape plasma membrane 40.33 38.51
AT2G29100.2 Thale cress plasma membrane 36.75 38.11
KRH50532 Soybean plasma membrane 31.42 37.99
OQU84757 Sorghum plasma membrane 35.31 37.87
OQU89536 Sorghum cytosol 35.01 37.83
KRH50533 Soybean plasma membrane 31.01 37.78
KXG19504 Sorghum golgi, plasma membrane, vacuole 33.67 37.77
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 35.93 37.58
EER98936 Sorghum plasma membrane 36.34 37.53
OQU89534 Sorghum plasma membrane 34.9 37.43
AT5G11210.5 Thale cress plasma membrane 34.9 37.15
AT5G27100.1 Thale cress plasma membrane 34.19 37.07
CDX85724 Canola plasma membrane 32.55 37.02
EER98937 Sorghum plasma membrane 35.72 36.93
AT2G29110.2 Thale cress plasma membrane 35.82 36.92
CDY54213 Canola plasma membrane 33.57 36.9
AT4G31710.2 Thale cress plasma membrane 34.39 36.84
Bra023313.1-P Field mustard plasma membrane 32.34 36.79
AT2G24720.1 Thale cress plasma membrane 34.6 36.74
Bra032063.1-P Field mustard plasma membrane 34.7 36.73
OQU89527 Sorghum plasma membrane 34.8 36.56
CDY51113 Canola plasma membrane 32.14 36.55
Bra032072.1-P Field mustard plasma membrane 33.47 36.5
KXG31244 Sorghum mitochondrion 37.77 36.46
CDY38574 Canola plasma membrane 36.03 36.4
CDY00544 Canola plasma membrane 28.97 36.33
AT2G29120.1 Thale cress plasma membrane 35.31 36.24
CDY39533 Canola plasma membrane 35.72 35.94
CDX73196 Canola cytosol, peroxisome, plasma membrane 33.57 35.93
CDY45595 Canola plasma membrane 31.42 35.7
AT2G24710.3 Thale cress plasma membrane 33.37 35.47
Bra040760.1-P Field mustard cytosol 30.5 35.39
CDY36173 Canola plasma membrane 29.17 35.36
AT5G11180.2 Thale cress plasma membrane 34.7 35.06
CDY31756 Canola cytosol, peroxisome, plastid 31.12 35.02
CDY31755 Canola cytosol 33.06 34.99
Bra040761.1-P Field mustard cytosol 33.16 34.8
CDY56837 Canola plasma membrane 32.65 34.75
CDX72325 Canola plasma membrane 23.95 34.72
PGSC0003DMT400023744 Potato cytosol 30.91 34.55
KXG35672 Sorghum mitochondrion, plasma membrane 34.29 34.54
CDY70035 Canola cytosol, plasma membrane 28.56 34.49
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 20.78 34.23
CDY58212 Canola cytosol, plasma membrane 28.86 33.81
CDY68132 Canola plasma membrane 34.6 33.5
Bra015817.1-P Field mustard plasma membrane 34.6 33.5
KXG35671 Sorghum plasma membrane 32.86 32.76
CDY13449 Canola cytosol 31.83 32.43
CDY63640 Canola cytosol 18.01 32.41
CDY31759 Canola cytosol, peroxisome, plasma membrane 15.46 32.06
Bra023989.1-P Field mustard cytosol 32.14 31.88
CDY50141 Canola plasma membrane 16.58 30.57
KXG20640 Sorghum plasma membrane 28.25 29.68
EER97313 Sorghum plasma membrane 27.33 28.9
EER90229 Sorghum plasma membrane 27.12 28.62
EER95720 Sorghum plastid 28.35 28.47
KXG20638 Sorghum plasma membrane 27.74 28.23
EER95721 Sorghum plastid 28.15 28.03
KXG29299 Sorghum plasma membrane 26.41 27.86
KXG26996 Sorghum plasma membrane 26.61 27.81
OQU84212 Sorghum mitochondrion 25.79 27.72
VIT_04s0069g00330.t01 Wine grape plastid 40.74 22.61
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A1B6QCP5InterPro:ANF_lig-bd_rcpt
ncoils:CoilGO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
EnsemblPlants:KXG35670ProteinID:KXG35670ProteinID:KXG35670.1PFAM:PF00060PFAM:PF00497PFAM:PF01094
PIRSF:PIRSF037090PANTHER:PTHR43891PANTHER:PTHR43891:SF10InterPro:Peripla_BP_ISMART:SM00079EnsemblPlantsGene:SORBI_3002G209000
SUPFAM:SSF53822SUPFAM:SSF53850InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI00081ADB06SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:60090187..60096382
Molecular Weight (calculated)
107993.0 Da
IEP (calculated)
6.737
GRAVY (calculated)
0.005
Length
977 amino acids
Sequence
(BLAST)
001: MVDCKNIVVS VIVLLSSWLL FVGHDHPRLL GRAQRPLTAP AAAASSVLHV GALLDLGSTG GRESRASISL ALDDFYASRQ PDTTVELHVA DCKDDEITAA
101: SAAIDLLKDF KVQAIIGPKT SMQARFIIGI GNMTNVPILS YSATSPYLSA KQSKYFIRTA LDDASQVPAI ASLIEYFSWR QAVLIYDDSE FGRGIIPYLV
201: DALQDIDTHI PYRSIIPSVP TDDQINVELN KLKTMQTRVF VVHMSSDVAA RFFVLAHDAE MLVDGYAWIV TDSVGNMFST LDGNTIHSMQ GVLGVRPYIP
301: RLDKLLNFRA RFLSRYKQQN PGAPEPANPN VFHLWAYDTA WAIAIALTKV GPLTLGFKSP SSQNSNDLND LRVLGVSQDG PRLVDAIQAT KFQGISGEFI
401: LVNGQRQASV FEIFNVIGNS YQSAGFWTPK FGLSKKLVTS SGPSDTVGLN TLIWPGGSAQ APRGWEWPVA GKKLKIAVPV KPAPNAFVNV KKNPATGKFD
501: VTGYCIDVFE AVMQEMPYAV PYEYVPVVDP NMATNSTISY TEICHQVSLK KYDAMVGDTT IIINRSLYVD FTLPYTESGV QMVVPMKKNW STSLWVFLKP
601: IEPILWAAFL SVFVFTSFVI WLVEHKESRD FGGSAWKQLV NIAYFSFQAL LAVPKDPKLK KWLSKFALIN LVLLVWLLEK LYSASLTSMM TVHQLQPTVD
701: DLNQLISNGD YIGYQGGSFV KDFLKSQKVE EHKIRKYSST DQYAEALMKG SWNGGVAAVF DEIPYLKLFM SKHCRNHSIV GRVHKTGGFG FVFPKGSPLV
801: ADVSRAILTV TEGDKFAGIE QRWFGYEVTC NNQANAIESG SVITLSSLRG VFFITIGLWA VVGVICAVIW FRPRQEEEPV QEAVAELAVE HVRGNRDESI
901: IWRIGRDSHL LIQLRGNPPR PADTGAKEVA QPEAGLDGVE PPPDTINLEG PDEQVRLVEH PLLTAAAEND KRNEQRN
Best Arabidopsis Sequence Match ( AT5G11210.5 )
(BLAST)
001: MSLFHHLVSR FLSLWLLIFL VFLVLSLGKS QKEALQVKVG IVLGSNVTLA DLSLRAINMS LSEFYNTHNG FKTRIVLNVR DSKQTVVGAA ASALYLIKKR
101: EVVAIIGPGT SMQAPFLINL GNQSKVPIIS FSATSPLLDS LRSPYFIRAT HDDSSQVQAI SAIIESFRWR EVVPIYVDNE FGEGILPNLV DAFQEINVRI
201: RYRSAISLHY SDDQIKKELY KLMTMPTRVF IVHMLPDLGS RLFSIAKEID MLSKGYVWIV TNGIADLMSI MGESSLVNMH GVLGVKTYFA KSKELLHLEA
301: RWQKRFGGEE LNNFACWAYD AATALAMSVE EIRHVNMSFN TTKEDTSRDD IGTDLDELGV ALSGPKLLDA LSTVSFKGVA GRFQLKNGKL EATTFKIINI
401: EESGERTVGF WKSKVGLVKS LRVDKVSHSS RRLRPIIWPG DTIFVPKGWE FPTNAKKLRI AVPKKDGFNN FVEVTKDENT NVPTVTGFCI DVFNTVMSQM
501: PYAVSYEYIP FDTPDGKPRG SYDEMVYNVF LGEFDGAVGD TTILANRSHY VDFALPYSET GIVFLVPVKD GKEKGEWVFL KPLTKELWLV TAASFLYIGI
601: MVWIFEYQAD EEFREQMIID KISSVFYFSF STLFFAHRRP SESFFTRVLV VVWCFVLLIL TQSYTATLTS MLTVQELRPT VRHMDDLRKS GVNIGYQTGS
701: FTFERLKQMR FDESRLKTYN SPEEMRELFL HKSSNGGIDA AFDEVAYIKL FMAKYCSEYS IIEPTFKADG FGFAFPLGSP LVSDISRQIL NITEGDAMKA
801: IENKWFLGEK HCLDSTTSDS PIQLDHHSFE ALFLIVFVVS VILLLLMLAS RGYQERQHNA SPNLPNDQAN AAQEEVNEEG NVGDHIVEVD TALVRRKKLT
901: SNTIPIRRVA PLSRLKSA
Arabidopsis Description
GLR2.5Glutamate receptor 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFN5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.