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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G219800.1 Wheat plasma membrane 71.96 73.51
TraesCS5D01G227800.1 Wheat plasma membrane 71.22 72.84
TraesCS5D01G228000.1 Wheat plasma membrane 60.74 72.47
TraesCS5B01G218900.1 Wheat plasma membrane 71.85 71.78
TraesCS5B01G218700.1 Wheat plasma membrane 69.95 70.85
OQU84757 Sorghum plasma membrane 59.58 61.8
OQU89527 Sorghum plasma membrane 58.31 59.25
OQU89536 Sorghum cytosol 53.86 56.31
EER98936 Sorghum plasma membrane 55.66 55.6
OQU89534 Sorghum plasma membrane 52.8 54.77
VIT_04s0069g00200.t01 Wine grape cytosol 23.81 51.02
GSMUA_Achr3P04970_001 Banana plasma membrane 49.95 49.32
VIT_04s0069g00380.t01 Wine grape cytosol 21.27 49.02
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 28.15 47.93
GSMUA_Achr9P13570_001 Banana plasma membrane 44.02 45.61
VIT_04s0069g00560.t01 Wine grape plasma membrane 42.54 44.87
VIT_04s0069g00720.t01 Wine grape cytosol 28.15 44.56
VIT_04s0069g00670.t01 Wine grape plasma membrane 42.12 43.31
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 37.46 42.75
VIT_04s0069g00170.t01 Wine grape plasma membrane 41.8 42.66
VIT_04s0069g00540.t01 Wine grape plasma membrane 31.64 42.29
VIT_04s0069g00620.t01 Wine grape plasma membrane 43.92 41.92
Solyc08g006500.2.1 Tomato extracellular 42.96 41.81
Bra023313.1-P Field mustard plasma membrane 36.93 40.63
AT2G29110.2 Thale cress plasma membrane 40.74 40.61
VIT_04s0069g00060.t01 Wine grape plasma membrane 41.8 40.35
CDY51113 Canola plasma membrane 36.51 40.16
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 36.72 40.07
CDX85724 Canola plasma membrane 36.19 39.81
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 39.05 39.51
AT2G29100.2 Thale cress plasma membrane 39.37 39.49
VIT_04s0069g00230.t01 Wine grape plasma membrane 42.01 38.81
KRH50533 Soybean plasma membrane 32.7 38.53
Bra040760.1-P Field mustard cytosol 34.29 38.48
Bra032072.1-P Field mustard plasma membrane 36.4 38.39
AT2G29120.1 Thale cress plasma membrane 38.62 38.34
AT5G27100.1 Thale cress plasma membrane 36.51 38.29
AT5G11210.5 Thale cress plasma membrane 37.14 38.24
CDY00544 Canola plasma membrane 31.32 38.0
KRH50532 Soybean plasma membrane 32.38 37.87
CDY38574 Canola plasma membrane 38.73 37.85
CDY70035 Canola cytosol, plasma membrane 32.38 37.82
CDY31756 Canola cytosol, peroxisome, plastid 34.6 37.67
CDY54213 Canola plasma membrane 35.24 37.46
Bra032063.1-P Field mustard plasma membrane 36.4 37.27
CDY39533 Canola plasma membrane 38.2 37.18
AT5G11180.2 Thale cress plasma membrane 37.99 37.13
CDY31755 Canola cytosol 35.98 36.84
CDX73196 Canola cytosol, peroxisome, plasma membrane 35.45 36.69
KXG19504 Sorghum golgi, plasma membrane, vacuole 33.76 36.62
AT2G24720.1 Thale cress plasma membrane 35.56 36.52
Bra040761.1-P Field mustard cytosol 35.98 36.52
CDY45595 Canola plasma membrane 33.23 36.51
AT2G24710.3 Thale cress plasma membrane 35.45 36.45
PGSC0003DMT400023744 Potato cytosol 33.65 36.38
CDY36173 Canola plasma membrane 30.79 36.1
KXG35672 Sorghum mitochondrion, plasma membrane 36.93 35.98
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 22.54 35.92
KXG35670 Sorghum plasma membrane 36.93 35.72
AT4G31710.2 Thale cress plasma membrane 34.29 35.53
CDY58212 Canola cytosol, plasma membrane 31.01 35.13
CDX72325 Canola plasma membrane 24.87 34.87
Bra015817.1-P Field mustard plasma membrane 37.14 34.79
CDY68132 Canola plasma membrane 37.14 34.79
CDY56837 Canola plasma membrane 33.65 34.64
KXG35671 Sorghum plasma membrane 35.87 34.59
KXG31244 Sorghum mitochondrion 36.93 34.49
CDY31759 Canola cytosol, peroxisome, plasma membrane 16.51 33.12
CDY50141 Canola plasma membrane 18.52 33.02
CDY63640 Canola cytosol 18.84 32.78
CDY13449 Canola cytosol 32.8 32.33
Bra023989.1-P Field mustard cytosol 33.44 32.08
EER97313 Sorghum plasma membrane 31.01 31.71
EER90229 Sorghum plasma membrane 30.26 30.89
KXG20640 Sorghum plasma membrane 28.99 29.46
KXG29299 Sorghum plasma membrane 28.78 29.37
KXG26996 Sorghum plasma membrane 28.89 29.2
KXG20638 Sorghum plasma membrane 29.52 29.06
OQU84212 Sorghum mitochondrion 27.94 29.04
EER95720 Sorghum plastid 29.63 28.78
EER95721 Sorghum plastid 28.57 27.52
VIT_04s0069g00330.t01 Wine grape plastid 42.01 22.56
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptUniProt:C5XD05
EnsemblPlants:EER98937ProteinID:EER98937ProteinID:EER98937.3GO:GO:0003674GO:GO:0004871GO:GO:0004930
GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154
GO:GO:0007165GO:GO:0007186GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0035235GO:GO:0038023InterPro:GPCR_3InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060
PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR00248PANTHER:PTHR43891PANTHER:PTHR43891:SF11
InterPro:Peripla_BP_ISMART:SM00079EnsemblPlantsGene:SORBI_3002G208500SUPFAM:SSF53822SUPFAM:SSF53850unigene:Sbi.5144
SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0003C69BFCSEG:seg:
Description
hypothetical protein
Coordinates
chr2:-:60014500..60020649
Molecular Weight (calculated)
104971.0 Da
IEP (calculated)
6.136
GRAVY (calculated)
-0.088
Length
945 amino acids
Sequence
(BLAST)
001: MEIANRIILL LLLLPGIAVA QNASGGRTQE VHVGVILDLG SLVGKIAITS ISLALEDFYA AHQNYSTKLV LHIRDSKSDD VQAASQALDL LENYNVETII
101: GPEKSSQAIF ISELGTKSHV PVISFTATSP TLSTSSLPYF VRATLNDSAQ VSCIASIIKA YGWRKVISIY EDSEYGRGII SYLVDVLQEV NVQVPYRSVI
201: PPSATSEQIT KELYKLMTMQ TRVYIVHMSS MLASTLFLKA KEIGMMEKGH VWIITGGVTN LIDSLHPSVV ESMNGALGVH FYVPKSTELD NFTTRWNMRY
301: RIDNPTDPPS KLSIFGLWSY DTIWAVAQAA EKVGLANATF RKPISKQKTT DLETLETSSN GPELLKEIMQ SKFIGLSGRF DLSDRQLVVS AFQIINIFGR
401: GWREIGYWSA QNGLSRKLNQ SQPTTYSTSM PDLNPVIWPG ETTDIPKGFE VPASGKKLQV GVRPSGYQQF IKVEKDQITG ATKATGLSVD VFEEAVKILP
501: YAVPFEYILF GSPEDTSSRS YDDFVYQVHL KIYDIVIGDI TIRYNRTFYA DFTVPYTESG IAMVVPVRDS INKNTWIFLK PLTPGMWLGS IAFFIYTGVV
601: VFSLEFLGNN QNVRRPIPRQ LGILIFFSLF EEKEIVERFL SRIVLIVWLC FLLVVTSSYT ANLSSMLTVQ QLHPTVNDIQ ELLKSGENVG YHRGSYVKGL
701: LEELGFERSK IKPYDTPDDF HNALSTGSSN GGIAALVHEV PYIKLFLANH CKGYTMVGPI YKAAGFGYAL AKGNPLLSDI SKAILNVTGG DTILQIEKKW
801: IGYQNDCQNV GPITGSSSLT FDNFRELFIL TGAASTSSLL IALVIYAYKK QHRSTEVIEV DRTQVEENRA NEDKNEPQEG NQGVAPEDHV QFRRDREEND
901: QLHEQTGSER VGDRNPHTST DACNGSVASH RGEPITVLQA ESIRS
Best Arabidopsis Sequence Match ( AT2G29110.2 )
(BLAST)
001: MMNPKKNNNT FLSYFVCLFL LLEVGLGQNQ ISEIKVGVVL DLNTTFSKIC LTSINLALSD FYKDHPNYRT RLALHVRDSM KDTVQASAAA LDLIQNEQVS
101: AIIGPIDSMQ AKFMIKLANK TQVPTISFSA TSPLLTSIKS DYFVRGTIDD SYQVKAIAAI FESFGWRSVV AIYVDNELGE GIMPYLFDAL QDVQVDRSVI
201: PSEANDDQIL KELYKLMTRQ TRVFVVHMAS RLASRIFEKA TEIGMMEEGY VWLMTNGMTH MMRHIHHGRS LNTIDGVLGV RSHVPKSKGL EDFRLRWKRN
301: FKKENPWLRD DLSIFGLWAY DSTTALAMAV EKTNISSFPY NNASGSSNNM TDLGTLHVSR YGPSLLEALS EIRFNGLAGR FNLIDRQLES PKFEIINFVG
401: NEERIVGFWT PSNGLVNVNS NKTTSFTGER FGPLIWPGKS TIVPKGWEIP TNGKKIKVGV PVKKGFFNFV EVITDPITNI TTPKGYAIDI FEAALKKLPY
501: SVIPQYYRFE SPDDDYDDLV YKVDNGTLDA VVGDVTITAY RSLYADFTLP YTESGVSMMV PVRDNENKNT WVFLKPWGLD LWVTTACFFV LIGFVVWLFE
601: HRVNTDFRGP PHHQIGTSFW FSFSTMVFAH REKVVSNLAR FVVVVWCFVV LVLTQSYTAN LTSFLTVQRF QPAAINVKDL IKNGDYVGYQ HGAFVKDFLI
701: KEGFNVSKLK PFGSSEECHA LLSNGSISAA FDEVAYLRAI LSQYCSKYAI VEPTFKTAGF GFAFPRNSPL TGDVSKAILN VTQGDEMQHI ENKWFMKQND
801: CPDPKTALSS NRLSLRSFWG LFLIAGIASF LALLIFVFLF LYENRHTLCD DSEDSIWRKL TSLFRNFDEK DIKSHTFKSS AVHHVSSPMT QYIPSPSTLQ
901: IAPRPHSPSQ DRAFELRRVS FTPNEERLTT QTIHFEDEES DIECVVEQ
Arabidopsis Description
ATGLR2.8Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B074]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.