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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU84757 Sorghum plasma membrane 75.27 76.84
Os09t0428300-00 Rice plasma membrane 65.7 70.07
Os09t0428600-00 Rice plasma membrane 35.81 61.55
EER98937 Sorghum plasma membrane 59.25 58.31
EER98936 Sorghum plasma membrane 52.9 52.01
OQU89536 Sorghum cytosol 49.68 51.11
OQU89534 Sorghum plasma membrane 49.57 50.6
Os09t0429000-00 Rice plasma membrane 50.75 50.59
VIT_04s0069g00200.t01 Wine grape cytosol 23.55 49.66
VIT_04s0069g00380.t01 Wine grape cytosol 20.22 45.85
GSMUA_Achr3P04970_001 Banana plasma membrane 46.67 45.35
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 26.56 44.5
GSMUA_Achr9P13570_001 Banana plasma membrane 42.47 43.31
VIT_04s0069g00560.t01 Wine grape plasma membrane 40.75 42.3
VIT_04s0069g00720.t01 Wine grape cytosol 26.99 42.04
VIT_04s0069g00170.t01 Wine grape plasma membrane 40.65 40.82
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 36.02 40.46
VIT_04s0069g00670.t01 Wine grape plasma membrane 39.89 40.37
VIT_04s0069g00540.t01 Wine grape plasma membrane 30.65 40.31
Solyc08g006500.2.1 Tomato extracellular 41.72 39.96
VIT_04s0069g00620.t01 Wine grape plasma membrane 42.37 39.8
AT2G29100.2 Thale cress plasma membrane 39.68 39.17
AT2G29110.2 Thale cress plasma membrane 39.46 38.71
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 36.02 38.68
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 38.06 37.9
VIT_04s0069g00060.t01 Wine grape plasma membrane 39.89 37.9
Bra040760.1-P Field mustard cytosol 34.09 37.65
CDY31755 Canola cytosol 37.1 37.38
AT5G27100.1 Thale cress plasma membrane 36.13 37.29
Bra032072.1-P Field mustard plasma membrane 35.91 37.28
Bra023313.1-P Field mustard plasma membrane 34.3 37.14
CDY51113 Canola plasma membrane 34.3 37.14
CDY31756 Canola cytosol, peroxisome, plastid 34.62 37.1
CDX85724 Canola plasma membrane 34.19 37.02
Bra040761.1-P Field mustard cytosol 36.99 36.95
KRH50532 Soybean plasma membrane 32.04 36.88
CDY70035 Canola cytosol, plasma membrane 32.04 36.84
KRH50533 Soybean plasma membrane 31.72 36.78
AT2G24720.1 Thale cress plasma membrane 36.34 36.74
AT2G29120.1 Thale cress plasma membrane 37.53 36.66
VIT_04s0069g00230.t01 Wine grape plasma membrane 40.22 36.56
CDY54213 Canola plasma membrane 34.84 36.45
CDY38574 Canola plasma membrane 37.85 36.4
CDY00544 Canola plasma membrane 30.22 36.07
CDY39533 Canola plasma membrane 37.63 36.05
CDY58212 Canola cytosol, plasma membrane 32.26 35.97
Bra032063.1-P Field mustard plasma membrane 35.59 35.86
AT5G11210.5 Thale cress plasma membrane 35.05 35.51
AT2G24710.3 Thale cress plasma membrane 34.95 35.36
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 22.47 35.24
KXG35670 Sorghum plasma membrane 36.56 34.8
KXG19504 Sorghum golgi, plasma membrane, vacuole 32.58 34.79
CDX73196 Canola cytosol, peroxisome, plasma membrane 33.98 34.61
KXG35672 Sorghum mitochondrion, plasma membrane 36.02 34.54
CDY56837 Canola plasma membrane 33.98 34.42
CDY36173 Canola plasma membrane 29.78 34.37
CDY45595 Canola plasma membrane 31.72 34.3
PGSC0003DMT400023744 Potato cytosol 32.04 34.1
KXG31244 Sorghum mitochondrion 37.1 34.09
AT4G31710.2 Thale cress plasma membrane 33.33 33.99
AT5G11180.2 Thale cress plasma membrane 35.27 33.92
CDY31759 Canola cytosol, peroxisome, plasma membrane 17.1 33.76
CDX72325 Canola plasma membrane 23.98 33.09
KXG35671 Sorghum plasma membrane 34.41 32.65
CDY50141 Canola plasma membrane 18.6 32.64
CDY13449 Canola cytosol 33.23 32.22
Bra015817.1-P Field mustard plasma membrane 34.95 32.21
CDY68132 Canola plasma membrane 34.95 32.21
Bra023989.1-P Field mustard cytosol 33.44 31.57
CDY63640 Canola cytosol 18.39 31.49
EER97313 Sorghum plasma membrane 29.25 29.44
EER95720 Sorghum plastid 30.65 29.29
EER90229 Sorghum plasma membrane 28.82 28.94
KXG20640 Sorghum plasma membrane 28.71 28.71
KXG20638 Sorghum plasma membrane 29.57 28.65
OQU84212 Sorghum mitochondrion 27.53 28.16
KXG29299 Sorghum plasma membrane 27.96 28.08
KXG26996 Sorghum plasma membrane 28.17 28.02
EER95721 Sorghum plastid 29.25 27.73
VIT_04s0069g00330.t01 Wine grape plastid 40.43 21.36
Os09t0428750-01 Rice mitochondrion 0.54 4.13
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A1W0W557InterPro:ANF_lig-bd_rcpt
GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnEnsemblPlants:OQU89527
ProteinID:OQU89527ProteinID:OQU89527.1PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090
PANTHER:PTHR43891PANTHER:PTHR43891:SF11InterPro:Peripla_BP_ISMART:SM00079EnsemblPlantsGene:SORBI_3002G208301SUPFAM:SSF53822
SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0009DC8C97SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:59998803..60003616
Molecular Weight (calculated)
103200.0 Da
IEP (calculated)
7.621
GRAVY (calculated)
-0.017
Length
930 amino acids
Sequence
(BLAST)
001: MAAAVRITML LFLAFSYDVV LGVTENKVEK FHVGVVLDLG TPVGKVARTS ISIAVEDFYA VHPNYTTRLV LHVRDSMTDD VQAAAAVIDL LENYNVQAII
101: GPQNSSQAVF VSALGNKCQV PVISFTARST YLSSHYLPYF VRATVNDSVQ VSSITSIIKT YGWREVVPIY MDNDDGKGII ADLVDVLEGK DVHVPYRSVL
201: DESATGEQIV QELYKLMTMQ TRVFVVHMSP SLGSLFFTKA KEIGMMSEGF VWIITDRLAN LIDLLNPSVV EAMNGALGVE SYVPKSKELD SFTMRWYMRS
301: RNDHPNDPTL KLNIFGLWSY DTIWGLAQAA EKAKVTKAKI LRQAKFLRPP ALKNSTSLGA LKKSRNGPAI LKAILQNKFE GLSGDFDLSD GQLQVSKFQI
401: INVVGKAQRV IGFWTAQNGL SQQLDQRSNI KYRNTTHDLK IVIWPGESTK IPRGWEIPTN GKKLQVGVVT GNKYQKYIDV VENSITGVIK ASGIAIDVFE
501: EAVKRLPYAL PYEYVVFNIT KNSSSSYDDF VNQVYLKKYD IAVGDITIRY NRRIAMVVPV RESISKNTWI FLKPLTPGMW IGTIILFIYT GIVIWFLELL
601: GNNKNIHGPV PRQLATMIYF SLFEEKEKVK RLISRIVLVI WLFFLLVLKS SYTASLTSML TVQQLYPTVT NVEELLKAGE CVGYPHGSYI KDLLEEIGFE
701: VSKIKPYESP EEFHDELSRG CKNGGVAALV DEIPYLKLFL AEHCKGYTMV GPIYKNAGFG YALQKGSPII GDISQAILNI TGGDTITRIE KKWIGDQNNC
801: QNVGTISGSG TLTFDSFAGP TIATGVASTT SLVVALTIYF CKSKQVEHEN GDSDNILPQG EIKDGGDSDD ILPQGEIKDG GHAEGQRQEA GAIEMHEQTN
901: KLMYSGSLVI YRCERISSPR AVRVSSSAQF
Best Arabidopsis Sequence Match ( AT2G29110.2 )
(BLAST)
001: MMNPKKNNNT FLSYFVCLFL LLEVGLGQNQ ISEIKVGVVL DLNTTFSKIC LTSINLALSD FYKDHPNYRT RLALHVRDSM KDTVQASAAA LDLIQNEQVS
101: AIIGPIDSMQ AKFMIKLANK TQVPTISFSA TSPLLTSIKS DYFVRGTIDD SYQVKAIAAI FESFGWRSVV AIYVDNELGE GIMPYLFDAL QDVQVDRSVI
201: PSEANDDQIL KELYKLMTRQ TRVFVVHMAS RLASRIFEKA TEIGMMEEGY VWLMTNGMTH MMRHIHHGRS LNTIDGVLGV RSHVPKSKGL EDFRLRWKRN
301: FKKENPWLRD DLSIFGLWAY DSTTALAMAV EKTNISSFPY NNASGSSNNM TDLGTLHVSR YGPSLLEALS EIRFNGLAGR FNLIDRQLES PKFEIINFVG
401: NEERIVGFWT PSNGLVNVNS NKTTSFTGER FGPLIWPGKS TIVPKGWEIP TNGKKIKVGV PVKKGFFNFV EVITDPITNI TTPKGYAIDI FEAALKKLPY
501: SVIPQYYRFE SPDDDYDDLV YKVDNGTLDA VVGDVTITAY RSLYADFTLP YTESGVSMMV PVRDNENKNT WVFLKPWGLD LWVTTACFFV LIGFVVWLFE
601: HRVNTDFRGP PHHQIGTSFW FSFSTMVFAH REKVVSNLAR FVVVVWCFVV LVLTQSYTAN LTSFLTVQRF QPAAINVKDL IKNGDYVGYQ HGAFVKDFLI
701: KEGFNVSKLK PFGSSEECHA LLSNGSISAA FDEVAYLRAI LSQYCSKYAI VEPTFKTAGF GFAFPRNSPL TGDVSKAILN VTQGDEMQHI ENKWFMKQND
801: CPDPKTALSS NRLSLRSFWG LFLIAGIASF LALLIFVFLF LYENRHTLCD DSEDSIWRKL TSLFRNFDEK DIKSHTFKSS AVHHVSSPMT QYIPSPSTLQ
901: IAPRPHSPSQ DRAFELRRVS FTPNEERLTT QTIHFEDEES DIECVVEQ
Arabidopsis Description
ATGLR2.8Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B074]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.