Factsheet for Solyc08g006500.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 4
golgi 4
plasma membrane 8
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067658	Potato	plastid	82.7	94.14
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	35.02	61.26
VIT_04s0069g00200.t01	Wine grape	cytosol	27.81	61.22
VIT_04s0069g00560.t01	Wine grape	plasma membrane	55.82	60.49
VIT_04s0069g00170.t01	Wine grape	plasma membrane	57.67	60.48
VIT_04s0069g00670.t01	Wine grape	plasma membrane	56.02	59.19
VIT_04s0069g00540.t01	Wine grape	plasma membrane	42.64	58.56
VIT_04s0069g00380.t01	Wine grape	cytosol	24.72	58.54
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	49.85	58.45
VIT_04s0069g00620.t01	Wine grape	plasma membrane	59.42	58.28
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	50.05	56.12
VIT_04s0069g00060.t01	Wine grape	plasma membrane	56.13	55.67
VIT_04s0069g00720.t01	Wine grape	cytosol	33.68	54.77
VIT_04s0069g00230.t01	Wine grape	plasma membrane	56.23	53.37
GSMUA_Achr6P26740_001	Banana	cytosol, plasma membrane, plastid	35.74	52.5
AT2G29110.2	Thale cress	plasma membrane	48.51	49.68
GSMUA_Achr7P16350_001	Banana	cytosol, peroxisome, plasma membrane	37.08	49.38
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.66	48.57
AT2G24720.1	Thale cress	plasma membrane	45.83	48.37
Bra032072.1-P	Field mustard	plasma membrane	44.59	48.33
AT5G27100.1	Thale cress	plasma membrane	44.8	48.28
AT2G29120.1	Thale cress	plasma membrane	47.27	48.21
AT2G29100.2	Thale cress	plasma membrane	46.76	48.2
Bra023313.1-P	Field mustard	plasma membrane	42.53	48.08
CDY51113	Canola	plasma membrane	42.53	48.08
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	46.24	48.07
GSMUA_Achr3P04970_001	Banana	plasma membrane	47.27	47.96
CDX85724	Canola	plasma membrane	42.22	47.73
CDY54213	Canola	plasma membrane	43.67	47.69
GSMUA_Achr4P02110_001	Banana	cytosol	39.44	47.4
CDY00544	Canola	plasma membrane	37.9	47.24
CDY70035	Canola	cytosol, plasma membrane	39.13	46.97
Bra032063.1-P	Field mustard	plasma membrane	44.59	46.91
AT4G31710.2	Thale cress	plasma membrane	43.87	46.71
TraesCS5A01G218900.1	Wheat	plasma membrane	37.28	46.65
AT5G11210.5	Thale cress	plasma membrane	44.08	46.62
CDY31755	Canola	cytosol	44.28	46.59
CDY39533	Canola	plasma membrane	46.55	46.55
TraesCS7B01G242400.1	Wheat	plasma membrane	43.36	46.52
Bra040760.1-P	Field mustard	cytosol	40.27	46.44
AT2G24710.3	Thale cress	plasma membrane	43.87	46.35
CDY31759	Canola	cytosol, peroxisome, plasma membrane	22.45	46.28
CDY38574	Canola	plasma membrane	46.03	46.23
CDY31756	Canola	cytosol, peroxisome, plastid	41.3	46.2
Os09t0429000-00	Rice	plasma membrane	44.28	46.09
Bra040761.1-P	Field mustard	cytosol	44.18	46.08
TraesCS7A01G341200.1	Wheat	plasma membrane	42.43	46.03
CDY36173	Canola	plasma membrane	38.21	46.03
CDX72325	Canola	plasma membrane	31.93	45.99
CDY45595	Canola	plasma membrane	40.68	45.93
TraesCS5D01G226500.2	Wheat	cytosol	41.3	45.78
CDX73196	Canola	cytosol, peroxisome, plasma membrane	42.95	45.67
CDY58212	Canola	cytosol, plasma membrane	39.13	45.56
TraesCS5D01G228000.1	Wheat	plasma membrane	36.97	45.33
CDY56837	Canola	plasma membrane	42.74	45.21
Solyc06g063200.1.1	Tomato	plasma membrane	45.42	45.14
Solyc06g063170.2.1	Tomato	cytosol	42.43	45.08
Os09t0429400-00	Rice	golgi	43.36	45.07
OQU89536	Sorghum	cytosol	41.71	44.8
HORVU5Hr1G063500.1	Barley	plasma membrane	42.74	44.67
GSMUA_Achr9P13570_001	Banana	plasma membrane	41.92	44.63
Os09t0428300-00	Rice	plasma membrane	40.06	44.61
GSMUA_AchrUn_...	Banana	golgi	39.13	44.6
TraesCS5A01G218400.1	Wheat	plasma membrane	42.53	44.6
AT5G11180.2	Thale cress	plasma membrane	44.39	44.57
Solyc06g063190.2.1	Tomato	plasma membrane	45.21	44.43
HORVU5Hr1G072170.1	Barley	plasma membrane	36.46	44.36
GSMUA_Achr6P01870_001	Banana	cytosol	39.86	44.18
TraesCS5B01G217800.1	Wheat	plasma membrane	38.62	44.01
HORVU5Hr1G063530.5	Barley	plasma membrane	41.4	43.84
TraesCS5D01G227800.1	Wheat	plasma membrane	41.71	43.83
Os09t0429500-00	Rice	plasma membrane	42.53	43.66
OQU84757	Sorghum	plasma membrane	40.89	43.58
CDY50141	Canola	plasma membrane	23.69	43.4
TraesCS5A01G219800.1	Wheat	plasma membrane	41.3	43.35
TraesCS5A01G218700.1	Wheat	plasma membrane	40.89	43.29
Os09t0428600-00	Rice	plasma membrane	24.1	43.25
TraesCS5D01G266900.1	Wheat	golgi, plasma membrane	28.22	43.15
HORVU7Hr1G081410.3	Barley	plasma membrane	25.33	43.01
TraesCS5D01G226700.3	Wheat	plasma membrane	40.58	42.97
EER98937	Sorghum	plasma membrane	41.81	42.96
Solyc06g063210.2.1	Tomato	mitochondrion, plasma membrane	42.64	42.55
TraesCS5B01G218900.1	Wheat	plasma membrane	41.4	42.49
TraesCS5B01G218700.1	Wheat	plasma membrane	40.78	42.44
Zm00001d020563_P001	Maize	plasma membrane	41.5	42.33
Bra015817.1-P	Field mustard	plasma membrane	43.87	42.22
CDY68132	Canola	plasma membrane	43.87	42.22
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	23.27	41.93
OQU89527	Sorghum	plasma membrane	39.96	41.72
Solyc06g063180.1.1	Tomato	plasma membrane	41.61	41.69
CDY13449	Canola	cytosol	41.09	41.61
Os06t0190800-01	Rice	cytosol, plasma membrane	35.12	41.59
Os09t0429200-00	Rice	plasma membrane	40.58	41.56
HORVU5Hr1G072250.1	Barley	cytosol, peroxisome, plastid	21.32	41.4
TraesCS5D01G266800.1	Wheat	plasma membrane	38.0	41.28
TraesCS5D01G225900.1	Wheat	golgi	36.77	41.22
HORVU7Hr1G031400.1	Barley	plasma membrane	30.79	41.18
TraesCS5B01G257800.1	Wheat	plasma membrane	38.0	40.86
TraesCS5D01G226800.1	Wheat	plasma membrane	40.06	40.86
HORVU5Hr1G063540.6	Barley	plasma membrane	38.31	40.79
TraesCS5A01G218600.1	Wheat	plasma membrane	38.31	40.74
Os02t0787600-01	Rice	golgi	41.4	40.69
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	37.38	40.6
HORVU5Hr1G010420.17	Barley	plasma membrane	37.59	40.56
TraesCS5B01G217700.1	Wheat	plasma membrane	38.1	40.53
Bra023989.1-P	Field mustard	cytosol	41.09	40.51
TraesCS6D01G330900.1	Wheat	plasma membrane	41.92	40.38
TraesCS5A01G042800.1	Wheat	plasma membrane	37.28	40.31
KXG19504	Sorghum	golgi, plasma membrane, vacuole	36.15	40.3
HORVU6Hr1G083680.5	Barley	plasma membrane	41.92	40.18
TraesCS5B01G046400.1	Wheat	plasma membrane	37.08	40.09
TraesCS5D01G226600.1	Wheat	plasma membrane	38.31	40.04
EER98936	Sorghum	plasma membrane	38.93	39.96
TraesCS6A01G347900.1	Wheat	plasma membrane	41.4	39.88
Os09t0431200-01	Rice	endoplasmic reticulum, extracellular	38.93	39.79
TraesCS6B01G380800.1	Wheat	plasma membrane	41.71	39.63
TraesCS6D01G330500.1	Wheat	plasma membrane	41.5	39.63
TraesCS2D01G025600.1	Wheat	plasma membrane	26.57	39.57
TraesCS5D01G226300.1	Wheat	plasma membrane	39.03	39.44
TraesCS5A01G218200.1	Wheat	plasma membrane	39.34	39.42
CDY63640	Canola	cytosol	22.04	39.41
HORVU6Hr1G083570.16	Barley	plasma membrane	41.3	39.39
TraesCS6B01G381400.1	Wheat	plasma membrane	41.09	39.35
TraesCS5D01G051300.1	Wheat	golgi	36.35	39.27
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	40.06	39.25
TraesCS6A01G347400.1	Wheat	plastid	42.02	39.23
TraesCS7B01G057800.1	Wheat	plasma membrane	35.53	39.2
KXG35670	Sorghum	plasma membrane	39.34	39.1
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	39.34	39.06
KXG31244	Sorghum	mitochondrion	40.68	39.03
HORVU5Hr1G063440.1	Barley	plasma membrane	39.44	39.0
Zm00001d018332_P001	Maize	plastid	39.96	38.96
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	39.13	38.89
TraesCS5A01G218000.1	Wheat	plasma membrane	39.24	38.88
Zm00001d020568_P001	Maize	golgi	38.31	38.71
TraesCS5D01G226100.1	Wheat	mitochondrion, plasma membrane	39.03	38.59
OQU89534	Sorghum	plasma membrane	36.15	38.53
TraesCS2D01G462300.1	Wheat	plasma membrane	38.62	38.5
KXG35672	Sorghum	mitochondrion, plasma membrane	38.41	38.45
Zm00001d005783_P002	Maize	plasma membrane	38.31	38.15
HORVU5Hr1G063490.1	Barley	golgi, vacuole	16.68	38.12
Zm00001d052064_P001	Maize	mitochondrion, plasma membrane	39.75	37.95
TraesCS3A01G023600.2	Wheat	plasma membrane	35.12	37.8
TraesCS6B01G438400.1	Wheat	plasma membrane	34.91	37.62
TraesCS5A01G259100.1	Wheat	cytosol, nucleus, plasma membrane	28.22	37.59
TraesCS5A01G218300.1	Wheat	plasma membrane	36.87	37.53
TraesCS5D01G226400.1	Wheat	plasma membrane	36.66	37.51
TraesCS5B01G217500.1	Wheat	plasma membrane	36.66	37.4
Zm00001d018329_P001	Maize	plasma membrane	38.31	37.2
TraesCS7A01G154100.1	Wheat	plasma membrane	35.53	36.86
GSMUA_Achr6P01860_001	Banana	cytosol, peroxisome, plasma membrane	36.66	36.85
Zm00001d005782_P001	Maize	plasma membrane	37.18	36.84
KXG35671	Sorghum	plasma membrane	36.56	36.22
Os09t0431100-01	Rice	plasma membrane	35.43	36.02
TraesCS5D01G226000.1	Wheat	plasma membrane	34.6	36.01
TraesCS5B01G217100.1	Wheat	plasma membrane	34.4	35.68
Solyc07g052400.2.1	Tomato	cytosol	29.35	35.14
TraesCS6B01G380900.1	Wheat	plasma membrane	34.81	35.1
HORVU5Hr1G063510.1	Barley	golgi, mitochondrion, plasma membrane	36.56	34.98
HORVU5Hr1G063430.8	Barley	plasma membrane	33.68	34.82
Solyc05g045650.2.1	Tomato	plasma membrane	31.41	34.78
Solyc04g082610.2.1	Tomato	plasma membrane	32.96	34.48
Solyc07g052390.2.1	Tomato	nucleus	29.87	33.45
Solyc02g082480.2.1	Tomato	plasma membrane	31.1	31.52
VIT_04s0069g00330.t01	Wine grape	plastid	55.82	30.8
Solyc02g077290.1.1	Tomato	nucleus	28.53	29.95
Solyc04g078860.2.1	Tomato	plasma membrane	25.64	29.61
Os09t0428750-01	Rice	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	UniProt:K4CID8	PFAM:PF00060
PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PANTHER:PTHR43891	PANTHER:PTHR43891:SF3	InterPro:Peripla_BP_I
SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-TM	InterPro:Solute-binding_3/MltF_N	EnsemblPlantsGene:Solyc08g006500.2
EnsemblPlants:Solyc08g006500.2.1	TMHMM:TMhelix	UniParc:UPI000276C043	SEG:seg	:	:

Description

Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:K4CID8]

Coordinates

chr8:+:1096757..1106781

Molecular Weight (calculated)

108734.0 Da

IEP (calculated)

6.880

GRAVY (calculated)

0.024

Length

971 amino acids

Sequence
(BLAST)

001: MRNKTRKSNI FSSISFSFFL LCLIIFFSME MTMAQNKSSI VSINVGVVLD MDEWFGKMGL SCISMALSDF YTFDGSNYNT RLVLHTRDSK KDVVGAAAAA
101: LDLLKNVEVE AIIGPFSSMQ ADFIINLGQK SQVPIISFSA TSPSISSARN QYFVRTTHND SSQVKPISSI IQSFGWRQIV PIYIENQFGE GIISFLADAL
201: EEINTRIPYR SVISEFATSD QIRSELLKLM NMQTRVFIVH MPISLGSKLF ATAKEIGMMS EGFVWIVTDA MANQLNSMNV SVIESMEGVI GVKPYAPKSK
301: KVEDFTQRWK MKFRKENPTM VDVELDIYGL WAYDSATALA MAVEKSRING AFFRKPNVSG NATDLEAFGV SRDGPKLLKA ILNTTFKGLS GDFQLVDGQL
401: QSPPYQIINL IGNGVKEIGF WTREHGIVRK LNSRRGYSVS KDNFRSIIWP GDTTSVPKGW VIPTNGKKLK IGVPVKDGFT EFVKVTRDVT TNTTIVTGYC
501: IDVFDAVMEA LPYYVPYEYV PFAAPNGKSA GDYNELVYQV FLGNFDVVVG DTTIVANRSQ FVDFTLPYTE SGVTMMVPIK DDNRDNTWVF LKPLTWELWL
601: TSFCSFVFIG FVIWLLEHRV NEDFRGPFWH QVGMIFWFSF STMVFAQKER IVSNLARFVL IIWFLVLLIL TSSYTASLTS MLTVEKLQPT VKDVKELLNS
701: KDYVGYQPGS FVVGLLRKMN FDEDRLKAYN TPEECVELLA KGSSNGGIAA VFDEIPYVKL FLANYCLKFT TIGPTYKTDG FGFAFPIGSP LVPDVSRAVL
801: NVTEGEKMVQ IERAWFGEST CSDLSSSLSS NSLGLDSFWG LFVVAVVAAV LALVIFLTKF IHEHWHIIGR SDLSLRERSR ILARKFDTKD YSCHTFKKSE
901: LRDVLAHSTH DLDCSRSPQG NLSLLPSPRT TGPPSPSNSS HTEQMIHFPG EERASPSRGE NEAVNGQVEM V

Best Arabidopsis Sequence Match ( AT2G29110.2 )
(BLAST)

001: MMNPKKNNNT FLSYFVCLFL LLEVGLGQNQ ISEIKVGVVL DLNTTFSKIC LTSINLALSD FYKDHPNYRT RLALHVRDSM KDTVQASAAA LDLIQNEQVS
101: AIIGPIDSMQ AKFMIKLANK TQVPTISFSA TSPLLTSIKS DYFVRGTIDD SYQVKAIAAI FESFGWRSVV AIYVDNELGE GIMPYLFDAL QDVQVDRSVI
201: PSEANDDQIL KELYKLMTRQ TRVFVVHMAS RLASRIFEKA TEIGMMEEGY VWLMTNGMTH MMRHIHHGRS LNTIDGVLGV RSHVPKSKGL EDFRLRWKRN
301: FKKENPWLRD DLSIFGLWAY DSTTALAMAV EKTNISSFPY NNASGSSNNM TDLGTLHVSR YGPSLLEALS EIRFNGLAGR FNLIDRQLES PKFEIINFVG
401: NEERIVGFWT PSNGLVNVNS NKTTSFTGER FGPLIWPGKS TIVPKGWEIP TNGKKIKVGV PVKKGFFNFV EVITDPITNI TTPKGYAIDI FEAALKKLPY
501: SVIPQYYRFE SPDDDYDDLV YKVDNGTLDA VVGDVTITAY RSLYADFTLP YTESGVSMMV PVRDNENKNT WVFLKPWGLD LWVTTACFFV LIGFVVWLFE
601: HRVNTDFRGP PHHQIGTSFW FSFSTMVFAH REKVVSNLAR FVVVVWCFVV LVLTQSYTAN LTSFLTVQRF QPAAINVKDL IKNGDYVGYQ HGAFVKDFLI
701: KEGFNVSKLK PFGSSEECHA LLSNGSISAA FDEVAYLRAI LSQYCSKYAI VEPTFKTAGF GFAFPRNSPL TGDVSKAILN VTQGDEMQHI ENKWFMKQND
801: CPDPKTALSS NRLSLRSFWG LFLIAGIASF LALLIFVFLF LYENRHTLCD DSEDSIWRKL TSLFRNFDEK DIKSHTFKSS AVHHVSSPMT QYIPSPSTLQ
901: IAPRPHSPSQ DRAFELRRVS FTPNEERLTT QTIHFEDEES DIECVVEQ

Arabidopsis Description

ATGLR2.8Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B074]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.