Factsheet for TraesCS5D01G225900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	96.19	93.18
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	57.04	91.65
TraesCS5D01G226100.1	Wheat	mitochondrion, plasma membrane	77.94	68.74
TraesCS5D01G226300.1	Wheat	plasma membrane	73.56	66.29
Zm00001d005783_P002	Maize	plasma membrane	71.25	63.28
KXG35672	Sorghum	mitochondrion, plasma membrane	70.55	62.99
Zm00001d020568_P001	Maize	golgi	69.63	62.75
Os09t0431200-01	Rice	endoplasmic reticulum, extracellular	68.36	62.32
GSMUA_Achr6P01870_001	Banana	cytosol	48.04	47.49
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	27.6	43.06
VIT_04s0069g00560.t01	Wine grape	plasma membrane	44.34	42.86
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	40.18	42.03
VIT_04s0069g00200.t01	Wine grape	cytosol	21.36	41.95
VIT_04s0069g00540.t01	Wine grape	plasma membrane	33.72	41.3
VIT_04s0069g00670.t01	Wine grape	plasma membrane	43.76	41.24
VIT_04s0069g00170.t01	Wine grape	plasma membrane	43.65	40.82
VIT_04s0069g00720.t01	Wine grape	cytosol	27.6	40.03
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	39.72	39.72
KRH50533	Soybean	plasma membrane	36.72	39.65
VIT_04s0069g00380.t01	Wine grape	cytosol	18.71	39.51
VIT_04s0069g00060.t01	Wine grape	plasma membrane	44.57	39.43
VIT_04s0069g00620.t01	Wine grape	plasma membrane	44.23	38.69
VIT_04s0069g00230.t01	Wine grape	plasma membrane	44.57	37.73
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.75	37.61
KRH50532	Soybean	plasma membrane	34.87	37.38
CDY31759	Canola	cytosol, peroxisome, plasma membrane	20.21	37.16
TraesCS5D01G228000.1	Wheat	plasma membrane	33.83	36.99
Solyc08g006500.2.1	Tomato	extracellular	41.22	36.77
TraesCS5D01G226500.2	Wheat	cytosol	36.95	36.53
Bra023313.1-P	Field mustard	plasma membrane	35.91	36.2
CDX85724	Canola	plasma membrane	35.8	36.09
CDY51113	Canola	plasma membrane	35.8	36.09
TraesCS5D01G227800.1	Wheat	plasma membrane	38.45	36.04
TraesCS5D01G266900.1	Wheat	golgi, plasma membrane	26.33	35.91
TraesCS2D01G025600.1	Wheat	plasma membrane	27.02	35.89
CDY70035	Canola	cytosol, plasma membrane	33.14	35.48
TraesCS5D01G226700.3	Wheat	plasma membrane	37.41	35.33
Bra032072.1-P	Field mustard	plasma membrane	36.49	35.27
CDY31756	Canola	cytosol, peroxisome, plastid	35.22	35.14
AT2G29100.2	Thale cress	plasma membrane	38.22	35.14
TraesCS6D01G330500.1	Wheat	plasma membrane	41.11	35.0
TraesCS5D01G226600.1	Wheat	plasma membrane	37.53	34.98
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	37.53	34.8
AT5G11210.5	Thale cress	plasma membrane	36.84	34.75
AT5G27100.1	Thale cress	plasma membrane	36.14	34.74
TraesCS6D01G330900.1	Wheat	plasma membrane	40.42	34.72
TraesCS2D01G462300.1	Wheat	plasma membrane	39.03	34.7
Bra032063.1-P	Field mustard	plasma membrane	36.95	34.67
TraesCS5D01G266800.1	Wheat	plasma membrane	35.68	34.56
Bra040760.1-P	Field mustard	cytosol	33.6	34.56
TraesCS5D01G051300.1	Wheat	golgi	35.8	34.48
AT2G29120.1	Thale cress	plasma membrane	37.88	34.45
AT2G29110.2	Thale cress	plasma membrane	37.64	34.39
CDY54213	Canola	plasma membrane	35.22	34.31
AT2G24720.1	Thale cress	plasma membrane	36.26	34.13
CDY58212	Canola	cytosol, plasma membrane	32.68	33.93
TraesCS5D01G226800.1	Wheat	plasma membrane	37.3	33.93
AT4G31710.2	Thale cress	plasma membrane	35.68	33.88
CDX73196	Canola	cytosol, peroxisome, plasma membrane	35.68	33.84
TraesCS5D01G226400.1	Wheat	plasma membrane	37.07	33.83
CDY00544	Canola	plasma membrane	30.37	33.76
AT2G24710.3	Thale cress	plasma membrane	35.8	33.73
CDY31755	Canola	cytosol	35.8	33.59
CDY50141	Canola	plasma membrane	20.55	33.58
CDX72325	Canola	plasma membrane	26.1	33.53
CDY38574	Canola	plasma membrane	37.3	33.4
CDY45595	Canola	plasma membrane	33.14	33.37
Bra040761.1-P	Field mustard	cytosol	35.8	33.3
CDY36173	Canola	plasma membrane	30.95	33.25
TraesCS5D01G226000.1	Wheat	plasma membrane	35.68	33.12
AT5G11180.2	Thale cress	plasma membrane	36.95	33.09
CDY39533	Canola	plasma membrane	36.95	32.96
PGSC0003DMT400023744	Potato	cytosol	33.26	32.95
CDY56837	Canola	plasma membrane	33.72	31.81
Bra015817.1-P	Field mustard	plasma membrane	36.61	31.42
CDY68132	Canola	plasma membrane	36.61	31.42
TraesCS2D01G226400.1	Wheat	plasma membrane	32.68	30.56
CDY13449	Canola	cytosol	32.68	29.51
TraesCS2D01G265700.1	Wheat	plasma membrane	30.83	28.83
Bra023989.1-P	Field mustard	cytosol	32.68	28.73
TraesCS2D01G455600.2	Wheat	plasma membrane	30.37	28.62
TraesCS1D01G398500.1	Wheat	plasma membrane	30.6	28.31
TraesCS7D01G444100.2	Wheat	plasma membrane	30.95	27.74
CDY63640	Canola	cytosol	17.32	27.62
VIT_04s0069g00330.t01	Wine grape	plastid	44.34	21.82

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PANTHER:PTHR43891	PANTHER:PTHR43891:SF6
InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G225900	EnsemblPlants:TraesCS5D01G225900.1	TIGR:cd06366	TIGR:cd13686	SEG:seg

Description

No Description!

Coordinates

chr5D:-:334257035..334291837

Molecular Weight (calculated)

95448.8 Da

IEP (calculated)

8.129

GRAVY (calculated)

0.010

Length

866 amino acids

Sequence
(BLAST)

001: MKATRLLRVL LLALVLLVGA SGAAAQGGGA VPRRRPRTVD VGVILDRTTW LGNMSWTCME LAMEDFYANA VDAAAAGVDL LKNVGVQAIV GPQTSTQAKF
101: LARLGNKSSV PIISFSADCP SRSGLTPYFI RTAWNDSSQA EAIASLVQKH NWREVVPVFE DDDTNTKFIP DLVDALKQVD TRVSYRCKIH PSATVDAMKA
201: VISSLRHNWT SVFIVRMSHA LALKFFQLAK DEGMMGQGFV WITAYGLTDI FDVVGSPALD VMQGVLGVKP HVQDTVKLQN FAQKWHSKYR LENPGTSLSE
301: PTVSGLYAYD TIWALASAAE NATYVNLDFG PSVTKNGSTD FDRIDTSKAA EKLRGALLKV NFSGMSGKFR IENTQLASSY YTIINIVGQE RREVGFWTPE
401: FGISGSLNMK SDIKTIIWPG GDHETVPRGW LLPRNKRLQI GVPANPGFGQ LVRYENGPEG KKGFCIKVFD EVVDNLPYQV LYDYHGFDDG QGNSNGTYDE
501: LIYKLYLKEF DAVVGDVTIL ANRSLYVDFT LPYTESGVRM LVPVLDRRQK TAWTFLKPLT ADLWLGTGAF VVFTGFVVWC IENHEDFKGT PANQIGSVFY
601: FSFSTLVFAH REKIKNNLSR IVVVVWLFVV LIVQQSYTAS LSSILTVEQL QPTVTNLDEV IRKGSHVGYL NDSFLPGLLK SLKIDESKMI ALNSVEEYND
701: ALSTGKVAVI VDEIPYLKLF LSKYCHNYTM TGPIYRFDGF GYAFPLGSPL TADITRGILK LASSGKMAEL QKDLYGDKSC PDKDDSQTSS SLTLHSFQGL
801: FSISGACSIL ALILHALITN KGVFSRWLAA ICSKLFHKSN ILQIMMRPVA NAGNTGSPPE GQGSRV

Best Arabidopsis Sequence Match ( AT2G29120.1 )
(BLAST)

001: MKVMNPRKTN NTFMYYFVLF VCGFVLMEGC LGQNQTTEIK VGVVLDLHTS FSKLCLTSIN ISLSDFYKYH SDYTTRLAIH IRDSMEDVVQ ASSAALDLIK
101: NEQVSAIIGP RTSMQAEFMI RLADKSQVPT ITFSATCPLL TSINSPYFVR ATLDDSSQVK AIAAIVKSFG WRNVVAIYVD NEFGEGILPL LTDALQDVQA
201: FVVNRCLIPQ EANDDQILKE LYKLMTMQTR VFVVHMPPTL GFRFFQKARE IGMMEEGYVW LLTDGVMNLL KSNERGSSLE NMQGVLGVRS HIPKSKKLKN
301: FRLRWEKMFP KKGNDEEMNI FALRAYDSIT ALAMAVEKTN IKSLRYDHPI ASGNNKTNLG TLGVSRYGPS LLKALSNVRF NGLAGEFELI NGQLESSVFD
401: VINIIGSEER IIGLWRPSNG IVNAKSKNTT SVLGERLGPV IWPGKSKDVP KGWQIPTNGK MLRVGIPVKK GFLEFVDAKI DPISNAMTPT GYCIEIFEAV
501: LKKLPYSVIP KYIAFLSPDE NYDEMVYQVY TGAYDAVVGD VTIVANRSLY VDFTLPYTES GVSMMVPLKD NKNTWVFLRP WSLDLWVTTA CFFVFIGFIV
601: WILEHRVNTD FRGPPHHQIG TSFWFAFSTM NFAHREKVVS NLARFVVLVW CFVVLVLIQS YTANLTSFFT VKLLQPTVTN WKDLIKFNKN IGYQRGTFVR
701: ELLKSQGFDE SQLKPFGSAV ECDELFSNGT ITASFDEVAY IKVILSQNSS KYTMVEPSFK TAGFGFVFPK KSPLTDDVSR AILNVTQGEE MQHIENKWFK
801: KPNNCPDLNT SLSSNHLSLS SFWGLFLIAG IASFLALLIF VANFLYEHKH TLFDDSENSF RGKLKFLVRN FDEKDIKSHM FKENAVHNVS SPITQGSSSP
901: LTDQSTPLPR SPEQYRELEL RRVSSISSGE LFTTQSEQVE DEESAIIQCE GE

Arabidopsis Description

GLR2.7Glutamate receptor 2.7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.