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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G390300.2
TraesCS1B01G418500.1
TraesCS1D01G398500.1
TraesCS2A01G220700.1
TraesCS2A01G257200.1
TraesCS2B01G246200.1
TraesCS2B01G285400.1
TraesCS2D01G226400.1
TraesCS2D01G265700.1
TraesCS7A01G455200.1
TraesCS7B01G355500.1
TraesCS7D01G444100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 TraesCS1A01G390300.2 AT1G05200.1 23590882
AT1G05200.1 TraesCS1B01G418500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS1D01G398500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G220700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G257200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G246200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G285400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G226400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G265700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7A01G455200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7B01G355500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7D01G444100.2 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G390300.2 Wheat plasma membrane 96.58 96.38
TraesCS1B01G418500.1 Wheat plasma membrane 95.94 95.84
HORVU1Hr1G086120.3 Barley plasma membrane 92.63 92.93
Zm00001d014451_P001 Maize plasma membrane 85.58 84.58
KXG20638 Sorghum plasma membrane 85.36 83.23
TraesCS7D01G444100.2 Wheat plasma membrane 77.35 74.95
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 61.43 63.96
Solyc05g045650.2.1 Tomato plasma membrane 56.73 60.55
VIT_12s0059g02270.t01 Wine grape plasma membrane 58.01 58.77
TraesCS2D01G265700.1 Wheat plasma membrane 57.8 58.42
Solyc07g052400.2.1 Tomato cytosol 50.53 58.32
TraesCS2D01G226400.1 Wheat plasma membrane 56.62 57.24
PGSC0003DMT400013497 Potato plasma membrane 57.69 56.9
KRH56121 Soybean plasma membrane 56.41 56.84
KRH25388 Soybean plasma membrane 55.98 56.71
PGSC0003DMT400065539 Potato plasma membrane 56.94 56.64
KRH26793 Soybean plasma membrane 56.41 55.76
CDY06165 Canola plasma membrane 51.71 55.57
KRH22559 Soybean plasma membrane 56.2 55.54
CDY49512 Canola plasma membrane 55.98 54.98
Bra015398.1-P Field mustard plasma membrane 55.77 54.89
CDY46839 Canola plasma membrane 55.77 54.89
AT2G32390.5 Thale cress plasma membrane 55.23 54.25
CDY10044 Canola plasma membrane 53.95 53.78
AT1G05200.1 Thale cress plasma membrane 55.02 53.7
Bra005589.1-P Field mustard plasma membrane 53.85 53.33
Bra032480.1-P Field mustard plasma membrane 53.63 52.24
TraesCS2D01G455600.2 Wheat plasma membrane 49.47 50.38
CDY48271 Canola plastid 37.82 47.9
CDY66698 Canola plasma membrane 45.19 47.58
CDX84735 Canola plasma membrane 44.77 47.18
CDY12211 Canola plasma membrane 42.84 45.11
TraesCS2D01G025600.1 Wheat plasma membrane 23.5 33.74
TraesCS5D01G228000.1 Wheat plasma membrane 27.46 32.45
TraesCS5D01G226500.2 Wheat cytosol 30.23 32.31
GSMUA_Achr5P00750_001 Banana mitochondrion 62.5 31.25
TraesCS5D01G227800.1 Wheat plasma membrane 30.45 30.84
TraesCS5D01G225900.1 Wheat golgi 28.31 30.6
TraesCS6D01G330900.1 Wheat plasma membrane 32.8 30.46
TraesCS5D01G266900.1 Wheat golgi, plasma membrane 20.41 30.08
TraesCS5D01G266800.1 Wheat plasma membrane 28.42 29.75
TraesCS5D01G051300.1 Wheat golgi 28.31 29.48
TraesCS6D01G330500.1 Wheat plasma membrane 31.84 29.3
TraesCS5D01G226100.1 Wheat mitochondrion, plasma membrane 30.66 29.23
TraesCS5D01G226700.3 Wheat plasma membrane 28.63 29.23
TraesCS5D01G226600.1 Wheat plasma membrane 28.85 29.06
TraesCS5D01G226300.1 Wheat plasma membrane 29.81 29.03
TraesCS2D01G462300.1 Wheat plasma membrane 30.13 28.95
TraesCS5D01G226400.1 Wheat plasma membrane 29.27 28.87
TraesCS5D01G226800.1 Wheat plasma membrane 28.85 28.36
TraesCS5D01G226000.1 Wheat plasma membrane 27.78 27.87
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891
PANTHER:PTHR43891:SF17InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixEnsemblPlantsGene:TraesCS1D01G398500EnsemblPlants:TraesCS1D01G398500.1TIGR:cd06366TIGR:cd13686
SEG:seg:::::
Description
No Description!
Coordinates
chr1D:+:465531235..465536188
Molecular Weight (calculated)
102316.0 Da
IEP (calculated)
6.521
GRAVY (calculated)
0.055
Length
936 amino acids
Sequence
(BLAST)
001: MGALRLTPLL LLVLLAAAAG RAAGAGPRPS EVAVGALFTY DSVIGRAARL AIELAVDDVN ADRTVLAATR LSLVAQDTNC SGFLGTIEAL ELMEKNVVAV
101: IGPQSSGIGH VISHVVNELH VPLLSFAATD PTLSASEYPY FIRTTMSDYF QMNAVASIVD YYQWKEVTAI FADDDYGRGG VSALGDALAT RRAKISHKAA
201: IPPNSNTEVI NDVLFRANMM ESRVMVVHAN PDTGMRIFSV ANKLQMMASG YVWIVTDWLA AVLDSSASRD LKGMSHIQGL VVLRQHTPES DAKDKFTTKW
301: NNAARSRGIN SGLNSYGFYA YDSVWAVARG IDQFLDNGQQ VNFSADPRLH RSKDSTLQLS TLKVFDGGEQ MLQQLLLTNF TGLTGLVQFG PDRNLVRPAY
401: DILNVGGSGS RLIGYWSNYS GLSVAAPETL YQKPSNASSV AQRLYNVVWP GDSTTTPKGW VFPNNGQPLR VGVPIKASFK ELVAGGRGSD NVTGYCIDIF
501: NAAIRLLPYP VPCQFITIGD GKKNPNYDDI ISMVADNSLD AAVGDFAIVR NRTKMAEFTQ PYIESGLVIV APVQRAPSSA WAFMKPFTLE MWCVTCALFI
601: FVGIVVWILE HRTNEEFRGS PRRQIITIIW FSFSTMFFSH RQNTGSALGR FVLIIWLFVV LIINSSYTAS LTSILTVQQL STGITGIDNL ISSGLPIGYQ
701: AGKFTKNYLI EELSIPESRL VALNTIKEYA DALRRGSGDG GVAAIVDEMP YVEIFLSYHC DFRIVGQEFT KEGWGFAFQR DSPLAADLST AILQLSESGQ
801: LQRIHDEWFT RPSCSTDDTE VGATSLGLRS FWGLFLVCAL ICLLALLVFF IRVCWQYSRY SSSEAAGEPG AADAVGPTAA AANAVERQRR PSRFGSFREL
901: VEFVDKKEAE VKRAMKRRPS EKDNQAAGSS DTQPVS
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.