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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH22559
KRH25388
KRH26793
KRH56121

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 KRH22559 AT1G05200.1 23590882
AT1G05200.1 KRH25388 AT1G05200.1 23590882
AT1G05200.1 KRH26793 AT1G05200.1 23590882
AT1G05200.1 KRH56121 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH25388 Soybean plasma membrane 93.65 94.16
KRH26793 Soybean plasma membrane 73.09 71.7
KRH22559 Soybean plasma membrane 72.98 71.59
VIT_12s0059g02270.t01 Wine grape plasma membrane 67.49 67.86
Solyc05g045650.2.1 Tomato plasma membrane 63.4 67.16
Solyc07g052400.2.1 Tomato cytosol 57.59 65.97
PGSC0003DMT400013497 Potato plasma membrane 66.52 65.12
PGSC0003DMT400065539 Potato plasma membrane 65.12 64.29
CDY06165 Canola plasma membrane 58.77 62.69
Bra015398.1-P Field mustard plasma membrane 63.19 61.72
GSMUA_Achr9P11690_001 Banana plasma membrane 59.2 61.59
CDY46839 Canola plasma membrane 62.97 61.51
AT1G05200.1 Thale cress plasma membrane 63.4 61.42
CDY49512 Canola plasma membrane 62.86 61.28
CDY10044 Canola plasma membrane 61.57 60.92
GSMUA_Achr9P02750_001 Banana plasma membrane 59.74 60.52
GSMUA_Achr6P00460_001 Banana plasma membrane 59.53 59.78
Bra005589.1-P Field mustard plasma membrane 60.6 59.58
Bra032480.1-P Field mustard plasma membrane 61.57 59.52
AT2G32390.5 Thale cress plasma membrane 61.03 59.5
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 56.84 58.73
TraesCS2A01G257200.1 Wheat plasma membrane 57.8 57.8
TraesCS2D01G265700.1 Wheat plasma membrane 57.59 57.78
TraesCS2B01G285400.1 Wheat plasma membrane 57.48 57.54
Zm00001d014451_P001 Maize plasma membrane 58.13 57.02
Os06t0680500-01 Rice cytosol, plasma membrane 54.47 56.85
Zm00001d014458_P001 Maize plasma membrane 56.3 56.85
EER97313 Sorghum plasma membrane 56.4 56.71
Zm00001d006508_P003 Maize plasma membrane 56.3 56.66
KXG20638 Sorghum plasma membrane 58.34 56.46
TraesCS7A01G455200.1 Wheat plasma membrane 56.73 56.42
TraesCS1D01G398500.1 Wheat plasma membrane 56.84 56.41
TraesCS1B01G418500.1 Wheat plasma membrane 56.84 56.35
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 56.62 56.26
HORVU1Hr1G086120.3 Barley plasma membrane 56.4 56.16
TraesCS1A01G390300.2 Wheat plasma membrane 56.51 55.97
TraesCS7B01G355500.1 Wheat plasma membrane 56.3 55.94
TraesCS2B01G246200.1 Wheat plasma membrane 53.93 55.92
EER90229 Sorghum plasma membrane 55.65 55.83
TraesCS2D01G226400.1 Wheat plasma membrane 55.22 55.4
KXG20640 Sorghum plasma membrane 55.44 55.38
CDY66698 Canola plasma membrane 52.64 55.01
HORVU2Hr1G045730.6 Barley plasma membrane 54.79 54.97
TraesCS2A01G220700.1 Wheat plasma membrane 54.68 54.74
Zm00001d018614_P003 Maize plastid 56.4 54.64
Zm00001d014456_P001 Maize plasma membrane 54.36 54.59
TraesCS7D01G444100.2 Wheat plasma membrane 56.62 54.45
CDX84735 Canola plasma membrane 51.88 54.28
CDY48271 Canola plastid 42.95 53.99
EER95720 Sorghum plastid 56.51 53.96
Os07t0103100-01 Rice plasma membrane 55.33 53.77
KRH60898 Soybean plasma membrane 52.42 52.65
KRH14012 Soybean plasma membrane 51.56 52.35
KRH51581 Soybean plasma membrane 52.1 52.1
Zm00001d018615_P001 Maize plasma membrane 53.82 52.08
CDY12211 Canola plasma membrane 48.76 50.96
KRH39417 Soybean golgi, plasma membrane, plastid 49.73 49.68
KRH07800 Soybean plasma membrane 48.87 49.56
KRH76527 Soybean plasma membrane 49.84 49.36
EER95721 Sorghum plastid 51.88 49.13
KRH39414 Soybean plasma membrane 49.41 48.73
KRH28939 Soybean plasma membrane 48.98 48.51
KRH39412 Soybean plasma membrane 49.3 48.36
KRH22563 Soybean plasma membrane 45.32 46.31
KRH26791 Soybean plasma membrane 44.78 45.76
KRH74102 Soybean cytosol, nucleus, peroxisome 30.79 44.07
KRH55155 Soybean plasma membrane 12.06 33.04
KRH50532 Soybean plasma membrane 28.09 32.3
KRH50533 Soybean plasma membrane 26.91 31.17
KRH05679 Soybean plasma membrane 18.41 30.54
KRH20347 Soybean nucleus 26.05 28.47
GSMUA_Achr5P00750_001 Banana mitochondrion 56.84 28.21
KRH50147 Soybean plasma membrane 26.91 27.81
KRH55157 Soybean cytosol 24.22 27.74
KRH21332 Soybean plasma membrane 27.99 27.69
KRH55152 Soybean plasma membrane 25.4 27.51
KRH22012 Soybean cytosol 25.3 27.39
KRH07011 Soybean plasma membrane 23.68 27.06
KRH15368 Soybean plasma membrane 25.51 27.02
KRH07010 Soybean mitochondrion 25.3 25.6
KRH07014 Soybean golgi, plasma membrane 23.9 25.14
KRH21331 Soybean plasma membrane 24.65 25.05
KRH21326 Soybean plasma membrane 24.97 25.05
KRH55154 Soybean cytosol 1.83 24.29
KRH55158 Soybean plasma membrane 25.62 15.89
Protein Annotations
Gene3D:1.10.287.70EntrezGene:100792741MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300EMBL:ACUP02004100
InterPro:ANF_lig-bd_rcptEnsemblPlantsGene:GLYMA_06G305000GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023UniProt:I1KFC6
InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnEnsemblPlants:KRH56121ProteinID:KRH56121ProteinID:KRH56121.1ProteinID:KRH56122.1
PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891
PANTHER:PTHR43891:SF12InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI000233A773SEG:seg::
Description
hypothetical protein
Coordinates
chr6:-:49400574..49406550
Molecular Weight (calculated)
103914.0 Da
IEP (calculated)
7.337
GRAVY (calculated)
0.028
Length
929 amino acids
Sequence
(BLAST)
001: MVMGRRTLLL LVLCLCLWIP FEVVGRKEPF FSPTSVNSTV SSRPKVVKFG ALFTMDSVIG RSALPAIMAA VKDVNSSTSI LPGIDLQVIL RDTNCSAFLG
101: TMEALQLMEN DVVAVVGPLS SGIAHVISHV VNELHVPLLS FGATDPTLSS LQYPYFVRTT QNDYFQMYAI ADFVDYYRWK KVIAIYIDDD NGRNGVSVLG
201: DAMSRKRAKI SYKAAFPPGA TESDISDLLN EVNLMESRVY VLHVNPDHGL AIFSIAKRLR MMDSGYVWIA TDWLPSVLDS FDLPDTDTMD LLQGVVAFHH
301: HIPDTDLKKS FLSRLKSQRD NETVSFNSYA LYAYDSVWLA ARALDAYLNE GGNISFSSDP KLRDTNGSML QLASLRTFDG GPQFLKTILG MNFTGLSGQV
401: EFDMEKNLVR PAYDILNIGG SGSHRIGYWS NHSGLSVIAP EVLYEKKPSK TSLKSNQQLY SVIWPGEATT TPRGWVFPNN GQPLRIAVPN RVSFKDFVAK
501: SKNPQGVQGY CIDVFEAALN LLTYPVPRQY MLFGNGERNP SYNELVQQVA QNNFDAVVGD VTIVTNRTRI VDFTQPFMPS GLVVVVPVEE EKSSPWSFLV
601: PFTTQMWLVT GAFFLFVGTV VWILEHRLNP EFRGSPRKQL ITVFWFSFST MFFSHRENTV SGLGRLVLII WLFVVLIINS SYTASLTSIL TVQQLSSQIA
701: GIDSLISSTQ PIGIQDGSFA RKYLIDDLNI AESRIVTLKN MEDYIDALRR GPKAGGVAAV VDELPYVEVL MSSIDCKFTI VGQEFTKSGW GFAFQRDSPL
801: AIDLSTAILQ LSESGDLQKI HDKWLNKKEC STVDTDSNKL ALTSFWGLFL ICGIACVIAL TIFFARIFCQ YNKFSPEPDK IDDKEMQPVR PRRPSRTRSI
901: KKLMVFVDRR EADIKEILRE NKKRRLSIG
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.