Factsheet for AT2G32390.5

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005589.1-P	Field mustard	plasma membrane	86.36	87.09
CDY48271	Canola	plastid	63.17	81.46
CDY66698	Canola	plasma membrane	74.29	79.64
CDX84735	Canola	plasma membrane	74.08	79.5
AT1G05200.1	Thale cress	plasma membrane	76.29	75.81
CDY12211	Canola	plasma membrane	69.15	74.13
Solyc05g045650.2.1	Tomato	plasma membrane	59.39	64.54
VIT_12s0059g02270.t01	Wine grape	plasma membrane	62.01	63.96
Solyc07g052400.2.1	Tomato	cytosol	54.04	63.5
PGSC0003DMT400065539	Potato	plasma membrane	61.8	62.59
KRH26793	Soybean	plasma membrane	61.39	61.77
PGSC0003DMT400013497	Potato	plasma membrane	61.28	61.54
KRH25388	Soybean	plasma membrane	59.39	61.26
KRH22559	Soybean	plasma membrane	60.65	61.03
KRH56121	Soybean	plasma membrane	59.5	61.03
GSMUA_Achr9P11690_001	Banana	plasma membrane	55.61	59.35
GSMUA_Achr9P30180_001	Banana	mitochondrion, plasma membrane	54.46	57.73
GSMUA_Achr6P00460_001	Banana	plasma membrane	55.61	57.3
GSMUA_Achr9P02750_001	Banana	plasma membrane	54.14	56.27
TraesCS7A01G455200.1	Wheat	plasma membrane	54.77	55.89
Zm00001d014451_P001	Maize	plasma membrane	55.19	55.54
HORVU1Hr1G086120.3	Barley	plasma membrane	54.35	55.52
TraesCS7B01G355500.1	Wheat	plasma membrane	54.46	55.51
HORVU7Hr1G104490.2	Barley	golgi, plasma membrane	54.35	55.4
TraesCS1D01G398500.1	Wheat	plasma membrane	54.25	55.23
Zm00001d014458_P001	Maize	plasma membrane	53.31	55.22
KXG20638	Sorghum	plasma membrane	55.61	55.21
EER90229	Sorghum	plasma membrane	53.62	55.18
TraesCS1A01G390300.2	Wheat	plasma membrane	54.14	55.01
Os06t0680500-01	Rice	cytosol, plasma membrane	51.31	54.94
TraesCS1B01G418500.1	Wheat	plasma membrane	53.52	54.43
TraesCS2D01G265700.1	Wheat	plasma membrane	52.78	54.32
TraesCS2B01G285400.1	Wheat	plasma membrane	52.89	54.31
KXG20640	Sorghum	plasma membrane	52.89	54.19
TraesCS7D01G444100.2	Wheat	plasma membrane	54.77	54.04
TraesCS2A01G257200.1	Wheat	plasma membrane	52.68	54.04
Zm00001d014456_P001	Maize	plasma membrane	51.94	53.51
EER97313	Sorghum	plasma membrane	51.73	53.35
TraesCS2B01G246200.1	Wheat	plasma membrane	50.16	53.35
HORVU2Hr1G045730.6	Barley	plasma membrane	51.84	53.35
TraesCS2D01G226400.1	Wheat	plasma membrane	51.63	53.13
Zm00001d006508_P003	Maize	plasma membrane	51.42	53.09
TraesCS2A01G220700.1	Wheat	plasma membrane	51.52	52.91
Os07t0103100-01	Rice	plasma membrane	51.42	51.26
Zm00001d018614_P003	Maize	plastid	51.52	51.2
EER95720	Sorghum	plastid	51.94	50.87
AT3G51480.1	Thale cress	plasma membrane	47.53	50.17
AT4G35290.2	Thale cress	plasma membrane	47.22	49.34
AT1G42540.2	Thale cress	plasma membrane	48.06	49.09
Zm00001d018615_P001	Maize	plasma membrane	49.42	49.06
AT2G17260.1	Thale cress	plasma membrane	47.43	48.86
EER95721	Sorghum	plastid	47.32	45.97
AT2G32400.1	Thale cress	plasma membrane	40.4	41.8
AT2G24720.1	Thale cress	plasma membrane	30.22	31.3
AT2G29110.2	Thale cress	plasma membrane	30.33	30.49
AT2G24710.3	Thale cress	plasma membrane	29.38	30.47
AT5G11210.5	Thale cress	plasma membrane	29.28	30.39
AT2G29120.1	Thale cress	plasma membrane	29.7	29.73
AT2G29100.2	Thale cress	plasma membrane	29.38	29.72
AT4G31710.2	Thale cress	plasma membrane	28.33	29.61
AT5G11180.2	Thale cress	plasma membrane	29.07	28.65
AT5G27100.1	Thale cress	plasma membrane	26.97	28.52
GSMUA_Achr5P00750_001	Banana	mitochondrion	55.4	28.21
AT5G48410.1	Thale cress	plasma membrane	24.97	27.67

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	EntrezGene:817800	ProteinID:AAC69939.2
ProteinID:AEC08676.1	ProteinID:AEC08677.1	EMBL:AF170494	InterPro:ANF_lig-bd_rcpt	ProteinID:ANM61813.1	ProteinID:ANM61816.1
ArrayExpress:AT2G32390	EnsemblPlantsGene:AT2G32390	RefSeq:AT2G32390	TAIR:AT2G32390	RefSeq:AT2G32390-TAIR-G	EnsemblPlants:AT2G32390.5
Symbol:ATGLR3.5	Unigene:At.13200	Symbol:GLR3.5	GO:GO:0003674	GO:GO:0004871	GO:GO:0004930
GO:GO:0004970	GO:GO:0005215	GO:GO:0005234	GO:GO:0005262	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0007154
GO:GO:0007165	GO:GO:0007186	GO:GO:0007267	GO:GO:0008066	GO:GO:0008150	GO:GO:0009719
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019722	GO:GO:0035235	GO:GO:0038023
GO:GO:0060079	GO:GO:0070588	GO:GO:0071230	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	RefSeq:NP_001031464.1
RefSeq:NP_001324010.1	RefSeq:NP_001324013.1	RefSeq:NP_565743.1	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094
PIRSF:PIRSF037090	PRINTS:PR01176	PANTHER:PTHR43891	PANTHER:PTHR43891:SF12	InterPro:Peripla_BP_I	UniProt:Q9SW97
SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix
UniParc:UPI000017A6D7	SEG:seg	:	:	:	:

Description

GLR3.5Glutamate receptor 3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW97]

Coordinates

chr2:-:13748280..13752281

Molecular Weight (calculated)

106817.0 Da

IEP (calculated)

7.558

GRAVY (calculated)

-0.072

Length

953 amino acids

Sequence
(BLAST)

001: MGFFVMIRDV SMGFMLLCIS ALWVLPIQGA GRESFSRNSS SSSLPSSVNV GALFTYDSFI GRAAKLAFVA AIEDINADQS ILRGTKLNIV FQDTNCSGFV
101: GTMGALQLME NKVVAAIGPQ SSGIGHIISH VANELHVPFL SFAATDPTLS SLQYPYFLRT TQNDYFQMNA ITDFVSYFRW REVVAIFVDD EYGRNGISVL
201: GDALAKKRAK ISYKAAFPPG ADNSSISDLL ASVNLMESRI FVVHVNPDSG LNIFSVAKSL GMMGSGYVWI TTDWLLTALD SMEPLDPRAL DLLQGVVAFR
301: HYTPESDNKR QFKGRWKNLR FKESLKSDDG FNSYALYAYD SVWLVARALD VFFSQGNTVT FSNDPSLRNT NDSGIKLSKL HIFNEGERFL QVILEMNYTG
401: LTGQIEFNSE KNRINPAYDI LNIKSTGPLR VGYWSNHTGF SVAPPETLYS KPSNTSAKDQ RLNEIIWPGE VIKPPRGWVF PENGKPLKIG VPNRVSYKNY
501: ASKDKNPLGV KGFCIDIFEA AIQLLPYPVP RTYILYGDGK KNPSYDNLIS EVAANIFDVA VGDVTIITNR TKFVDFTQPF IESGLVVVAP VKGAKSSPWS
601: FLKPFTIEMW AVTGALFLFV GAVIWILEHR FNEEFRGPPR RQIITVFWFS FSTMFFSHRE NTVSTLGRFV LLVWLFVVLI INSSYTASLT SILTVQQLTS
701: RIEGMDTLIA SNEPIGVQDG TFAWKFLVNE LNIAPSRIIP LKDEEEYLSA LQRGPRGGGV AAIVDELPYI KALLSNSNCK FRTVGQEFTR TGWGFAFQRD
801: SPLAVDMSTA ILQLAEEGKL EKIRKKWLTY DHECTMQISD TENYQISVQS FWGLFLICGV VWFIALTLFC WKVFWQYQRL RPEESDEVQA RSEEAGSSRG
901: KSLRAVSFKD LIKVVDKREA EIKEMLKEKS SKKLKDGQSS AENSQSKDHE TPQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.