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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d006508_P003
Zm00001d014451_P001
Zm00001d014456_P001
Zm00001d014458_P001
Zm00001d018614_P003
Zm00001d018615_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 Zm00001d006508_P003 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014451_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014456_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014458_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d018614_P003 AT1G05200.1 23590882
AT1G05200.1 Zm00001d018615_P001 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG20640 Sorghum plasma membrane 89.62 89.14
Zm00001d014458_P001 Maize plasma membrane 77.95 78.37
Zm00001d014451_P001 Maize plasma membrane 77.3 75.5
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 59.57 61.29
VIT_12s0059g02270.t01 Wine grape plasma membrane 56.97 57.03
Solyc05g045650.2.1 Tomato plasma membrane 54.05 57.01
Solyc07g052400.2.1 Tomato cytosol 48.11 54.87
KRH25388 Soybean plasma membrane 54.59 54.65
Zm00001d006508_P003 Maize plasma membrane 54.49 54.6
KRH56121 Soybean plasma membrane 54.59 54.36
KRH26793 Soybean plasma membrane 54.92 53.64
CDY06165 Canola plasma membrane 50.49 53.62
Zm00001d018614_P003 Maize plastid 55.46 53.49
PGSC0003DMT400013497 Potato plasma membrane 54.7 53.32
KRH22559 Soybean plasma membrane 54.49 53.22
PGSC0003DMT400065539 Potato plasma membrane 54.05 53.13
CDY46839 Canola plasma membrane 53.95 52.47
Bra015398.1-P Field mustard plasma membrane 53.95 52.47
CDY49512 Canola plasma membrane 53.95 52.36
CDY10044 Canola plasma membrane 52.97 52.18
AT2G32390.5 Thale cress plasma membrane 53.51 51.94
AT1G05200.1 Thale cress plasma membrane 53.73 51.82
Bra032480.1-P Field mustard plasma membrane 52.65 50.68
Bra005589.1-P Field mustard plasma membrane 51.46 50.37
Zm00001d018615_P001 Maize plasma membrane 52.11 50.21
Zm00001d002532_P003 Maize plasma membrane 49.95 49.62
Zm00001d015007_P003 Maize plasma membrane 46.16 47.39
CDY66698 Canola plasma membrane 44.97 46.79
CDX84735 Canola plasma membrane 44.43 46.28
CDY48271 Canola plastid 36.54 45.74
Zm00001d033769_P001 Maize golgi, plasma membrane 30.81 45.17
Zm00001d054016_P004 Maize plasma membrane 46.16 44.9
CDY12211 Canola plasma membrane 41.19 42.86
Zm00001d005782_P001 Maize plasma membrane 32.65 30.82
Zm00001d018332_P001 Maize plastid 32.86 30.52
GSMUA_Achr5P00750_001 Banana mitochondrion 60.43 29.86
Zm00001d052064_P001 Maize mitochondrion, plasma membrane 32.22 29.3
Zm00001d020568_P001 Maize golgi 29.84 28.72
Zm00001d018329_P001 Maize plasma membrane 31.03 28.7
Zm00001d005783_P002 Maize plasma membrane 30.05 28.51
Zm00001d020563_P001 Maize plasma membrane 27.68 26.89
Protein Annotations
Gene3D:1.10.287.70EntrezGene:103626311MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A1D6GTI9
InterPro:ANF_lig-bd_rcptProteinID:AQK66314.1GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176
PANTHER:PTHR43891PANTHER:PTHR43891:SF17InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850
SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI000221F92BEnsemblPlantsGene:Zm00001d014456EnsemblPlants:Zm00001d014456_P001
EnsemblPlants:Zm00001d014456_T001SEG:seg::::
Description
Glutamate receptor 3.4
Coordinates
chr5:+:48034203..48043502
Molecular Weight (calculated)
101320.0 Da
IEP (calculated)
6.631
GRAVY (calculated)
0.076
Length
925 amino acids
Sequence
(BLAST)
001: MMGGVAQLVV VAALLATAAA APTAAAAGAL PSEVAVGALF TYDSTIGRAA QLAIELAVDD VNADDKVLAW TKLNLVSMDT NCSGFLGTIK ALELMEKNVV
101: AVIGPQSSGI GHAISQVVNE LHVPLLSFAA TDPTLSASEY PYFLRTTTSD YFQMNAVASI VDYYQWKRVT AVYIDDEYGR GGVSALGDAL ALKRAQVSYK
201: ATIPPNSNTD VIRDVLFKAN MMESRVMVVH VNPDTGLRVF SAAKKLQMMA SGYVWIVTDW LAAVLDSSAS RNPKYMSNIQ GVIVLRQHTP DSDAKNKFIS
301: RWNNVARNRS MTPGLNSYGF YAYDSVWAVA RSVDQFLNAG NQINFSTDPR LHDPNGTTLR LSTLKIFDGG DQMLQQLLLT NFTGLTGAVK FDSGGNLLHP
401: AYDILNVGRS GTHLIGYWSN YSGLSVAAPE ILYQMSPNAS TSTHQLNSVV WPGDSTDIPR GWVFPNDGQP LRVGVPVKPS FKALVSGSTP DSVRGYCIDV
501: FKSAIKLLPY PVPYQFIPIG DGTKNPSYVS IVGMVASNTL DAAVGDFAIV RNGTRLAEYT QPYIDSGLVI VAPVKHITSS AWAFLKPFTW EMWFITGALF
601: ILVGIVVWLL EHRSNPEFRG PPCNQVITIF WFSFSTMFFS HQENTRTALG RFVLIIWMFV VLIITSSYTA SLTSILTVQQ LATGITGLDS LISSSLPIGY
701: QTGKFTKKYL MLNLNVPESR LVQLNTIEEY ADALNRGPKN GGVAAIIDEK PYIDIFLSHY CNFKIVGQQF TREGWGFAFQ KDSPLAADMS TAILQLSESG
801: QLQSIHDEWF TQPSCATNDE SNVGATRLGL GSFWGLFLIC ALICLFAVVV FFIRVCWQYK QYSNSEDADE SNEAGADGAG KRQRKLSRLG SFQEILKFFD
901: MKEEEVMKSS MKRRPGEKDN HAAGF
Best Arabidopsis Sequence Match ( AT2G32390.5 )
(BLAST)
001: MGFFVMIRDV SMGFMLLCIS ALWVLPIQGA GRESFSRNSS SSSLPSSVNV GALFTYDSFI GRAAKLAFVA AIEDINADQS ILRGTKLNIV FQDTNCSGFV
101: GTMGALQLME NKVVAAIGPQ SSGIGHIISH VANELHVPFL SFAATDPTLS SLQYPYFLRT TQNDYFQMNA ITDFVSYFRW REVVAIFVDD EYGRNGISVL
201: GDALAKKRAK ISYKAAFPPG ADNSSISDLL ASVNLMESRI FVVHVNPDSG LNIFSVAKSL GMMGSGYVWI TTDWLLTALD SMEPLDPRAL DLLQGVVAFR
301: HYTPESDNKR QFKGRWKNLR FKESLKSDDG FNSYALYAYD SVWLVARALD VFFSQGNTVT FSNDPSLRNT NDSGIKLSKL HIFNEGERFL QVILEMNYTG
401: LTGQIEFNSE KNRINPAYDI LNIKSTGPLR VGYWSNHTGF SVAPPETLYS KPSNTSAKDQ RLNEIIWPGE VIKPPRGWVF PENGKPLKIG VPNRVSYKNY
501: ASKDKNPLGV KGFCIDIFEA AIQLLPYPVP RTYILYGDGK KNPSYDNLIS EVAANIFDVA VGDVTIITNR TKFVDFTQPF IESGLVVVAP VKGAKSSPWS
601: FLKPFTIEMW AVTGALFLFV GAVIWILEHR FNEEFRGPPR RQIITVFWFS FSTMFFSHRE NTVSTLGRFV LLVWLFVVLI INSSYTASLT SILTVQQLTS
701: RIEGMDTLIA SNEPIGVQDG TFAWKFLVNE LNIAPSRIIP LKDEEEYLSA LQRGPRGGGV AAIVDELPYI KALLSNSNCK FRTVGQEFTR TGWGFAFQRD
801: SPLAVDMSTA ILQLAEEGKL EKIRKKWLTY DHECTMQISD TENYQISVQS FWGLFLICGV VWFIALTLFC WKVFWQYQRL RPEESDEVQA RSEEAGSSRG
901: KSLRAVSFKD LIKVVDKREA EIKEMLKEKS SKKLKDGQSS AENSQSKDHE TPQ
Arabidopsis Description
GLR3.5Glutamate receptor 3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW97]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.