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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 5
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d006508_P003
Zm00001d014451_P001
Zm00001d014456_P001
Zm00001d014458_P001
Zm00001d018614_P003
Zm00001d018615_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 Zm00001d006508_P003 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014451_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014456_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014458_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d018614_P003 AT1G05200.1 23590882
AT1G05200.1 Zm00001d018615_P001 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER95721 Sorghum plastid 78.85 77.17
Zm00001d018614_P003 Maize plastid 76.88 76.96
TraesCS2B01G285400.1 Wheat plasma membrane 66.15 68.43
TraesCS2D01G265700.1 Wheat plasma membrane 65.94 68.36
TraesCS2A01G257200.1 Wheat plasma membrane 66.15 68.35
Os07t0103100-01 Rice plasma membrane 62.92 63.18
Solyc05g045650.2.1 Tomato plasma membrane 52.6 57.58
Solyc07g052400.2.1 Tomato cytosol 47.19 55.86
Zm00001d006508_P003 Maize plasma membrane 53.02 55.15
PGSC0003DMT400013497 Potato plasma membrane 53.96 54.58
PGSC0003DMT400065539 Potato plasma membrane 53.33 54.41
KRH25388 Soybean plasma membrane 52.19 54.22
VIT_12s0059g02270.t01 Wine grape plasma membrane 52.08 54.11
KRH56121 Soybean plasma membrane 52.08 53.82
KRH26793 Soybean plasma membrane 52.71 53.43
CDY06165 Canola plasma membrane 48.33 53.27
Zm00001d014458_P001 Maize plasma membrane 51.04 53.26
KRH22559 Soybean plasma membrane 52.19 52.9
Zm00001d014451_P001 Maize plasma membrane 51.46 52.16
Zm00001d014456_P001 Maize plasma membrane 50.21 52.11
Bra015398.1-P Field mustard plasma membrane 50.73 51.21
CDY10044 Canola plasma membrane 50.0 51.12
CDY49512 Canola plasma membrane 50.73 51.1
Zm00001d002532_P003 Maize plasma membrane 49.38 50.91
CDY46839 Canola plasma membrane 50.42 50.89
Zm00001d015007_P003 Maize plasma membrane 47.4 50.5
Bra032480.1-P Field mustard plasma membrane 49.79 49.74
AT1G05200.1 Thale cress plasma membrane 49.69 49.74
AT2G32390.5 Thale cress plasma membrane 49.06 49.42
Bra005589.1-P Field mustard plasma membrane 48.65 49.42
Zm00001d054016_P004 Maize plasma membrane 47.29 47.74
Zm00001d033769_P001 Maize golgi, plasma membrane 31.04 47.23
CDY66698 Canola plasma membrane 42.6 46.01
CDX84735 Canola plasma membrane 41.56 44.93
CDY48271 Canola plastid 34.17 44.38
CDY12211 Canola plasma membrane 39.27 42.41
Zm00001d018332_P001 Maize plastid 32.71 31.53
Zm00001d005782_P001 Maize plasma membrane 31.56 30.92
Zm00001d052064_P001 Maize mitochondrion, plasma membrane 31.04 29.3
Zm00001d018329_P001 Maize plasma membrane 30.42 29.2
Zm00001d020568_P001 Maize golgi 28.85 28.82
Zm00001d005783_P002 Maize plasma membrane 29.27 28.82
Zm00001d020563_P001 Maize plasma membrane 27.19 27.42
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A1D6HQP9InterPro:ANF_lig-bd_rcpt
GO:GO:0003674GO:GO:0004871GO:GO:0004930GO:GO:0004970GO:GO:0005215GO:GO:0005234
GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0007186
GO:GO:0007267GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235
GO:GO:0038023GO:GO:0060079InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnProteinID:ONM50889.1PFAM:PF00060
PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891PANTHER:PTHR43891:SF7
InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_N
TMHMM:TMhelixUniParc:UPI0008430032EnsemblPlantsGene:Zm00001d018615EnsemblPlants:Zm00001d018615_P001EnsemblPlants:Zm00001d018615_T001SEG:seg
Description
Glutamate receptor 3.4
Coordinates
chr7:+:1022757..1026799
Molecular Weight (calculated)
103356.0 Da
IEP (calculated)
4.657
GRAVY (calculated)
0.048
Length
960 amino acids
Sequence
(BLAST)
001: MASSAATTTT TLLRLLCLCT VLLVAMQAAA ARPPNVTIGS LFAFDSVIGR SARSAIQLAV DDVNRDPTVL NGTTLTVVFQ DTKCSGFAGT IQAGLELMEK
101: EVVAVVGPQS SVIAHVVSHV ANQLRVPLLS FAATDPALAS TQYPYFVRTV HDDRFQMAAI ADVVSHFGWR EVTAVYVDDD YGRGGVIALA DALEATRARV
201: SYRAAFPLGA DRATLADILQ RANFMESRVF IVHASPDSGL NVFAAARGLG MMVSGYTWIA TDWLATAAID AAGAASNSSN IQGVLTLRQY TPDSDAKASL
301: LSRLAAADPT SNNATASVNT YGLFAYDSVW MAAYAIDQFL GDAGGGNVSF SADPTIRDAN GSALGLSALR VFDQGEQLLG KVMLSNFTGV TGHVEFQFDA
401: GVNSSGTLVN PAYEILNVGG TGVRRVAYWS NYTRLSVDAP KQLGDGVPPP NSTSTTAQQQ MSNVIWPGGT TATPRGWVFA DNGKPLTIGV PYRTSYKEFV
501: SKDETSPDGV SGYCVDVFKA AVALLPYPVP VSFVLFGDGV ENPSYNELVQ KVADGYFDAA VGDISIVTNR TRVVDFTQPY IDSGLMIVST VKSSSSDEWA
601: FLKPFTPELW ATVVAFCIFV GAVVWILEHR HNDEFRGPLK KQMVTIFWFS FSSMFFTQRE DTVSVPGRFV VIMWLFVVLI ITQSYTASLT SILTVQQLST
701: GIQGLSDLLA SNDPIGYQVG SFAGSYMNKE LGVAATRLRE LDPDDYADSL QRGPRGGGVA AIVDELPYME LFLSSNCQFQ TVGQEFTKSG WGFAFPLDSP
801: LAVDLSTAIL TLSENGDLQR IHDNWLNTGT CDSQNNGVGG AERLSLRNFG GLFLICGVAC VIALLIHFVR ILFQFCQYRR HGAADGAQEE DENDGDDDRD
901: GDSDKEKSQR RPARQTSIRD LMSFVDMEEA EVKRAIRSRS GKSMGRSRSD TSDAPSSSPV
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.